Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1834 ATGGGTCCTTTCACTTGGGTCTTCTCCTTCATTTTAGCAGCTACCCTTTTGAGCCACTGCTGTTTTTCGCTCACTGAAGATGGTCTAACATTGTTGGAGATCAAAAGTACTTTAAATGACACTAAGGACGTCCTCAGTAATTGGAACCCTTCAGATGAATCTCCCTGCAAATGGACTGGTATCTCTTGCCATCCCGAGGACTCTCGTGTCATCTCAATTAATCTACCATTCATGCAACTAGGAGGGATTATATCTCCCAGCATTGGTAAACTTAGTAGATTGCAGAGACTGGCTCTCCACCAGAACGGCTTACATGGATATATTCCCAATGAACTTGCCAATTGTTCTGAACTTAGAGCCCTGTACTTGAGGGCTAATTATCTTCAAGGTGGCATTCCATCAAATGTTGGGAACCTTTCATATCTTACCATACTTGATTTATCAAGCAATTCCCTTAAGGGTAGTATACCATCATCAATTGGTCGTCTCACACACTTGCGCAATCTGAATTTATCTACTAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTAAGCACCTTTGGTAACAACTCGTTCTTTGGCAATCAAGGTCTTTGTGGCCGACAAGTGAACAAGCCGTGCCGGACCTCACTGGGGTTTCCTGTCATTTTACCACATGCTGCAAGTGATGAAGCTGCAGTTCCTGCCAAACGGTCCTCTCATTACATGAAAGGACTGTTGATTGGTGCAATATCGACAGCAGGGTTTGTATTGGTCATATTTATTGTATTCATGTGGACTCGTTTGGTGTCGAAGAAAGAAAGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAAAAATCGCGAAACAAGTGCGAAGCTTATTACATTTCATGGTGATCTACCGTATCCAACACGTGAGATCATAGAAAAGCTGGAAGCCCTGAATGAAACAAATGTTGTTGGCTCAGGAGGTTTTGGCACTGTGTATCGGATGGTCATGAATGATTCTGGAGCTTTTGCTGTGAAGAAAATTGATAGGACTCAAGACGGTCCAGACCAAGTTGTTGAAAGAGAATTGGAGATATTGGGTAGCATTAAGCACATAAATTTAGTGAAATTGCGTGGTTATTGCCGGCTTCCTTCTTCAAAGCTTCTCATATATGACTATCTGGCGGCGGGTAGTTTGGATGATTTCTTGCACGAATATGGACCACAAAAGTCTTTGGATTGGAGTGCTCGGTTAAACATAGCGCTAGGCTCTGCTCGAGGATTGGCGTACTTGCACCATGATTGCTGTCCAAAGATTGTTCACTGCAACATAAAATCCAGCAACATTCTTCTTGATGGGAACTTAGAGCCGCACGTATCTGACTTTGGTCTTGCAAAGCTTTCGGTTAATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATCTGGCTCCAGAATACTTGGAAAGTGGGATAGGAACTGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTCTTGCTGGAGCTTGTAACAGGGAAGAGACCGAGTGATCCATTTTTCTCAAAGCGGGGCGTTAATATTGTTGGTTGGTTGAACACACTGCGGGGAGAAGACCAATTGGAGAACATCGTTGATAATAGGTGCCGGAATGCAGATGTCGAAACTGTAGAAGCGATTCTCGAAATAGCGGCGAGGTGCACCGATGGCAACCCGACTATTCGACCTACAATGAACCAAGTACTGCAGCAGCTAGAGCAAGAGGTGATGTCGCCTTACCCGAGCGATTACACCGAGTCTCACTCGGATTATTCGTGA 1803 43.82 MGPFTWVFSFILAATLLSHCCFSLTEDGLTLLEIKSTLNDTKDVLSNWNPSDESPCKWTGISCHPEDSRVISINLPFMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRALYLRANYLQGGIPSNVGNLSYLTILDLSSNSLKGSIPSSIGRLTHLRNLNLSTNFFFGEIPDIGVLSTFGNNSFFGNQGLCGRQVNKPCRTSLGFPVILPHAASDEAAVPAKRSSHYMKGLLIGAISTAGFVLVIFIVFMWTRLVSKKERTAKSYMEVKKQKNRETSAKLITFHGDLPYPTREIIEKLEALNETNVVGSGGFGTVYRMVMNDSGAFAVKKIDRTQDGPDQVVERELEILGSIKHINLVKLRGYCRLPSSKLLIYDYLAAGSLDDFLHEYGPQKSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDGNLEPHVSDFGLAKLSVNGDSHVTTVVAGTFGYLAPEYLESGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGVNIVGWLNTLRGEDQLENIVDNRCRNADVETVEAILEIAARCTDGNPTIRPTMNQVLQQLEQEVMSPYPSDYTESHSDYS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31757981 31761532 - CePI673135_06g018340.1 Cec06g1834 206571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1834 600 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515(InterPro)
Cec06g1834 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1834 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Cec06g1834 600 SUPERFAMILY L domain-like 22 186 - -
Cec06g1834 600 Gene3D Phosphorylase Kinase; domain 1 270 386 - -
Cec06g1834 600 ProSitePatterns Protein kinases ATP-binding region signature. 317 340 IPR017441 GO:0005524(InterPro)
Cec06g1834 600 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 387 591 - -
Cec06g1834 600 Gene3D Transferase(Phosphotransferase) domain 1 387 591 - -
Cec06g1834 600 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Cec06g1834 600 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Cec06g1834 600 SUPERFAMILY Protein kinase-like (PK-like) 290 581 IPR011009 -
Cec06g1834 600 Pfam Protein kinase domain 313 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1834 600 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 86 IPR050647 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1834 Cec-Chr6:31757981 Cec07g1228 Cec-Chr7:27777961 1.70E-128 dispersed
Cec01g1275 Cec-Chr1:23203252 Cec06g1834 Cec-Chr6:31757981 8.60E-40 wgd
Cec01g1526 Cec-Chr1:29863629 Cec06g1834 Cec-Chr6:31757981 1.30E-221 wgd
Cec04g2144 Cec-Chr4:39273938 Cec06g1834 Cec-Chr6:31757981 1.30E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72106 PF00069 Pkinase 5.00E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1834 - - - 0.0