Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1846 ATGGAAGCTCCTCCGATTCCGAGCAACAGATGGATGGCTACCGTTGCCAGCATTTGGATCCAGTGCATCTGCGGTCCATCCTACACCTTCAGCATCTACTCCGCCGCCCTCAAATCCACTCAAAACTACGATCAATCCACTCTCGACACTGTTTCCGTCGTCAAAGACATCGGCGCCACCGCCGGGGTTCTCTCCGGCCTCCTCTACTCCTCCGTCGTCTCCACAGACCACCCCCGTCGCCCATGGATCGTCCTCACCGTCGGAGCTATTCAATGTTTCCTTGGATACATTTTCATGTGGGCCGCCGTCTCCGGCTTAATCCCTCGACCGCCGGTGCCGACAATGTGTCTGTTCGTGTTCTTAGCCGTCCATGCCCAAGTTTTCTTCAACACGGCTAATGTTGTCACTGGCGTTCATAATTTCCAGCTCTACAGCGGCACCATTGTCGGCATTCTAAAGGGATTTTTGGGTCTTAGTGCAGCAGTACTGATCCAATTCTCCAACGCATTCTTCAACGGAGACCCTGTAAATTATCTTTTGATGCTGGCGATTTTGCCGGCGCTTACGACTCTGTTGCTCATGAGATTCGTCGTAATCGACAATAAAACAGAGACCGGAAATGAATTGACCCATTTGAATTCCCTCTCGAAAATTGCTCTAACAATCTGCGGATATCTCACGATTCTAATCATTTTAGACAACGTTCTCAATCTACCGACATGGGTTCGCATCTTCACCTTCATTCTCCTCCTCGCGTTTCTTGTTTCCCCTGTCGGAATCGCAATCAGAGCAAAAACAGAAGAATCTGTTTTCAAAACGAAGCTTCAAATTACCGAGAATCCCGTTGAATATCATCGCATTCCCAGCGAGGAGAAGATCAATGATGAGCTGGTGATTGTTAAAGACGGAGAAATGAATATAATCGAGGCAATTGGCACAATGAATTTCTGGCTATTGTTTTTCGCGATGATGTGCGGAATGGGTTCTGGGTTAGCCACCATAAACAACATGAACCAACTGTGCCAGTCCTTGGGATACAGAACAGTCGAAATCAATACATTCGTTTCACTTTGGAGCATTTGGAATTTCCTTGGGCGTTTGGGATCTGGCTATGCCTCTGATCTTCTCCTCTGGAAATTAGGGTGGGCGAGGCCATTGTTAATGGCCATTGCCTTGCTAACAATGAGCATCGGCCATATCATCGTAGCTTTAGGATTTCGTGGGAATTTATACTTGGGATCGGTGATTGTCGGGATTTGTTACGGGTCTCAATGGTCGTTAATGCCGGTAATTACGTCGGAGATATTTGGAGTAAAGCATATGGGTACGATTTACAATACCATTGCTGTGGCTAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCCGCCGGAGATAACTCTTGCTCCGGTGGACACTGTTTTATGACGTCTTTTCTGATCATGGCGGCGGTGGCTTTCTTGGGGTTTGTGGTTGTTGTTGCTCTGTTTTTCCGTACCAGAAGGTTCAATCAACTTCTTGTACAGAGAAGGCTCAAAGATTAG 1575 47.05 MEAPPIPSNRWMATVASIWIQCICGPSYTFSIYSAALKSTQNYDQSTLDTVSVVKDIGATAGVLSGLLYSSVVSTDHPRRPWIVLTVGAIQCFLGYIFMWAAVSGLIPRPPVPTMCLFVFLAVHAQVFFNTANVVTGVHNFQLYSGTIVGILKGFLGLSAAVLIQFSNAFFNGDPVNYLLMLAILPALTTLLLMRFVVIDNKTETGNELTHLNSLSKIALTICGYLTILIILDNVLNLPTWVRIFTFILLLAFLVSPVGIAIRAKTEESVFKTKLQITENPVEYHRIPSEEKINDELVIVKDGEMNIIEAIGTMNFWLLFFAMMCGMGSGLATINNMNQLCQSLGYRTVEINTFVSLWSIWNFLGRLGSGYASDLLLWKLGWARPLLMAIALLTMSIGHIIVALGFRGNLYLGSVIVGICYGSQWSLMPVITSEIFGVKHMGTIYNTIAVASPIGSYVLSVRVIGYIYDREASAGDNSCSGGHCFMTSFLIMAAVAFLGFVVVVALFFRTRRFNQLLVQRRLKD 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31851492 31853149 + CePI673135_06g018460.1 Cec06g1846 206583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1846 524 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 516 - GO:0016020(PANTHER)
Cec06g1846 524 CDD MFS_Mch1p_like 10 499 - -
Cec06g1846 524 Gene3D MFS general substrate transporter like domains 308 515 IPR036259 -
Cec06g1846 524 SUPERFAMILY MFS general substrate transporter 239 512 IPR036259 -
Cec06g1846 524 Pfam Nodulin-like 10 261 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1846 Cec-Chr6:31851492 Cec10g2008 Cec-Chr10:34857088 3.70E-87 dispersed
Cec06g1845 Cec-Chr6:31845564 Cec06g1846 Cec-Chr6:31851492 7.30E-187 tandem
Cec06g1846 Cec-Chr6:31851492 Cec06g1847 Cec-Chr6:31856416 6.30E-119 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1846 - - - 0.0