Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1863 ATGGCGACAGTTCCTGACCGCTTCCGTCGCAACCCCATTGATAGACTTGTTGGGATTTCCGACGATTCGAAACAGAGTTGTAGTTCGACGACCCAGCTTCATGTTCTTGCTGTTGATGATAGCCTCGTCGATCGGAAGGTTATTGAGCGGTTGTTGAAGATCTCGTCGTGTAAAGTTACTGCTGTTGAGAGCGGGAGAAGTGCTCTTCAGTATCTGGGTTTGGATGGGGAAAACAATTCTGTTCAGTTTAGTAGTGGTTTGAAGGTGAATCTCATCATTACAGATTACTCCATGCCTGAAATGACTGGATATGAATTGCTGAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTTTGGCTCGAATAGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGAAGGAAAGAAAATTGGGTTAAAGAGGAAGCTACATCTTGATCATGATCACGATCACCACCCGTCGTCTCCAGTTTCTCCGGCGTCATCCGCGGCAGTGTTCGACCCTTGCCACGGATTTCTGCAACGATCAGCACCGTCATTTCGACACGAAGACGAAGGCGAAGACGAAGAGCCAAAGCAGAGAGCTTCATCGGAGCTAAGGAAAATGACTCACTCGAAGCTTGAAGACGCCACTGGTTTGAAGGAAGACCTCATCGCAGACGCCTGGGCGGCCGCCATTAAAGCTCACAAACATTCGAAGCCATTTCTCGTTGATAGAACCCGAGATTTCTCCATCATCAGCTTCGCCGGATCTTGGTCGTCCGAAGCCTGGTTCTCTGCTTCTGATTCATCTTTCGGAGAAACAAAGATCGACACTCGGCTGTTTCCATCCGTCAGGAGCATCGGCGTCGACGATTATGCCGTCGTCAACTCTGCATTTTTCCAGAAATTTGAGGGAATTTTGGGGAAGCTTAAGGAGGTTCTGAGAGTGAATAAGCCTGTGGTGTTTACCGGCCACTCAGCCGGAGGTCCGATAGCCATTCTCGCAACCATCTGGCTGTTGGAACAGCAAAGAAACTCAGACTCAAACACCAACTCCACTCCTCCAAGATGCATCACATTTGGATCTCCCCTTGTTGGCAACTTCATTTTCTCCCATGCCCTCAAAAGGGAGAAATGGTCCACCCATTTCGTGCACTTCGTCATGAGATACGACATTGTTCCACGAATCCATCTTGCTCCTCTACCTTCCTTGCAACCACAATTGCAAACCATCCTCAACTCCCTGAACTCGAGATCACCAGGGTCATCATCAAATGGAAATATAGCTACTGAATTCTTCATGACAGTGATGAGGAATGCATCGGCTGTGGTAAGCAATGCCGCCTGCCATCTTATGGGAAACACTAACCTTTTGCTAGACACTTTGAAAAGCTTTGTGAAATTGAGTCCTTACAGCTCTTTTGGCACTTACATTTTCTTTACTGAGAGCGAGAAAGTGGTGGTGGTGAGCAACCCGGATGCTATTTTACAAATACTATTCTACGCTTGTCAGTTGAGCTCTGAGAGCGAATCTGATCACATTGCTCAACAGAGTTTAAATGCCCATTGGGGTTATGAATCTAAAATGCAGAAATTGGAGCTCCTACATGCCATTCGTCTGGATGAATTGGATAAGCTTCCATTGTCCTTAACGAGCAGGAATACACCATTAACTGAAGCGTTGAATGAACTTGGCCTAAGTTCGAGAGCTTTATTGAATCTTCGGGCAGCGGGCACATTTGAAGAGCAGAAAATGAAAAATCAAGAAAGGATGGAAGCAAAGAAACAATATATCAAGGAACGATTGGATTGGCTGGAAGAAAATTATAGAGCTGTATGTAAGGTTGATGGTTTGGGATACTATGATGCATTTAAACTCCAGAAGGATCCGAAAGACTTCCAAGCTAATATCAAGAGGCTTGAGCAAGCAGGCATATGGGATGAGATCGTAGAGATGCTCAAAAGATACGAGCTCCCAGAGGAATTCGAGGGCGATGACGAATGGATAAAACTTGGAACCAGGTTTCGCCGTCTCATTGAGCCTCTAGATATTGCTAACTACTATAGACACTCGAAGAATGATGATACTGGTCCTTATCTGGTAAAAGGAAGGCCAAAACGTTACAGATTTACACAAAGATGGCTCGAACATAATCAAAAGATGACAGAACCCAGTGAAGAATCAACTCTTTGGGCAAGGGTTGAGGAGCTTCGTATCCAAACCAAAACCAAAATGTACGCTGAATATTCAAGAGAAATTATAGAGCTGGAGAAGAAGATGAAGCGATGGGTCACTGAGATTGAAGATGACATGTTGTTAAAGAAATCTACCTTCATGGAGTGGTGGAAGACGCTACCGGAACATCATAGATCACAGTCTTGTATTAGGGATGATATCGAGAGGATGGCAACTGACGACGATGCTATTAACACGATGTAG 2523 44.75 MATVPDRFRRNPIDRLVGISDDSKQSCSSTTQLHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGENNSVQFSSGLKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENILARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENEGKKIGLKRKLHLDHDHDHHPSSPVSPASSAAVFDPCHGFLQRSAPSFRHEDEGEDEEPKQRASSELRKMTHSKLEDATGLKEDLIADAWAAAIKAHKHSKPFLVDRTRDFSIISFAGSWSSEAWFSASDSSFGETKIDTRLFPSVRSIGVDDYAVVNSAFFQKFEGILGKLKEVLRVNKPVVFTGHSAGGPIAILATIWLLEQQRNSDSNTNSTPPRCITFGSPLVGNFIFSHALKREKWSTHFVHFVMRYDIVPRIHLAPLPSLQPQLQTILNSLNSRSPGSSSNGNIATEFFMTVMRNASAVVSNAACHLMGNTNLLLDTLKSFVKLSPYSSFGTYIFFTESEKVVVVSNPDAILQILFYACQLSSESESDHIAQQSLNAHWGYESKMQKLELLHAIRLDELDKLPLSLTSRNTPLTEALNELGLSSRALLNLRAAGTFEEQKMKNQERMEAKKQYIKERLDWLEENYRAVCKVDGLGYYDAFKLQKDPKDFQANIKRLEQAGIWDEIVEMLKRYELPEEFEGDDEWIKLGTRFRRLIEPLDIANYYRHSKNDDTGPYLVKGRPKRYRFTQRWLEHNQKMTEPSEESTLWARVEELRIQTKTKMYAEYSREIIELEKKMKRWVTEIEDDMLLKKSTFMEWWKTLPEHHRSQSCIRDDIERMATDDDAINTM 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31985770 31993278 - CePI673135_06g018630.1 Cec06g1863 206600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1863 840 Pfam Lipase (class 3) 280 425 IPR002921 GO:0006629(InterPro)
Cec06g1863 840 Pfam Response regulator receiver domain 35 154 IPR001789 GO:0000160(InterPro)
Cec06g1863 840 SUPERFAMILY alpha/beta-Hydrolases 271 435 IPR029058 -
Cec06g1863 840 CDD Lipase_3 270 435 - -
Cec06g1863 840 Gene3D alpha/beta hydrolase 264 553 IPR029058 -
Cec06g1863 840 MobiDBLite consensus disorder prediction 213 239 - -
Cec06g1863 840 Gene3D - 32 263 - -
Cec06g1863 840 Coils Coil 616 636 - -
Cec06g1863 840 PANTHER PROTEIN EDS1-RELATED 240 825 IPR044214 GO:0006952(InterPro)
Cec06g1863 840 CDD REC_typeA_ARR 35 157 - -
Cec06g1863 840 SUPERFAMILY CheY-like 32 157 IPR011006 -
Cec06g1863 840 Coils Coil 767 794 - -
Cec06g1863 840 Pfam Enhanced disease susceptibility 1 protein EP domain 635 822 IPR041266 -
Cec06g1863 840 ProSiteProfiles Response regulatory domain profile. 34 162 IPR001789 GO:0000160(InterPro)
Cec06g1863 840 SMART REC_2 33 158 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1863 Cec-Chr6:31985770 Cec10g1628 Cec-Chr10:30724162 6.70E-38 dispersed
Cec04g0302 Cec-Chr4:12006086 Cec06g1863 Cec-Chr6:31985770 4.10E-45 transposed
Cec04g0555 Cec-Chr4:22848952 Cec06g1863 Cec-Chr6:31985770 1.20E-41 transposed
Cec05g2913 Cec-Chr5:39237960 Cec06g1863 Cec-Chr6:31985770 1.90E-41 transposed
Cec07g0579 Cec-Chr7:7332711 Cec06g1863 Cec-Chr6:31985770 2.50E-39 transposed
Cec08g0604 Cec-Chr8:17555276 Cec06g1863 Cec-Chr6:31985770 9.20E-35 transposed
Cec10g1470 Cec-Chr10:29095222 Cec06g1863 Cec-Chr6:31985770 3.80E-24 transposed
Cec05g2725 Cec-Chr5:37768331 Cec06g1863 Cec-Chr6:31985770 2.00E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29837 PF18117 EDS1_EP 2.50E-52 No_clan Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1863 K18875 - csv:101214385 995.727