Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1867 ATGGCGATTCCCATTCCCAGCCGACAGCTGTTCATCGACGGCGAGTGGAGGGAACCAGTCCTCAAGAACCGCATCCCCATCATCAACCCCACTACTGAAGAAACAATCGGATCTATTCCCGCGGCTACTGCGGAAGATGTAGAGTTAGCAGTTGATGCTGCTCGAAAAGCACTTGCGAGGAATAAAGGCAAAGATTGGGCCTCTGCTCCGGGGGCTCATCGTGCCAAGTATTTGCGTGCTATTGCTGCTAAGATAACAGAGAGGAAATCAGAATTAGCAAAACTTGAAGCAATAGACTGTGGAAAACCGCTGGAAGAAGCTGCATGGGACATGGATGATGTTGCTGGGTGCTTCGAGTACTATGCAGATCTTGCCGAAGGGTTGGATGCAAAGCAAAACGCTCCTGTTTCTCTTCCCATGGATACATTCAAGAGCTATGTTCGTAAAGAACCCATTGGAGTTGTTGGGTTGATTACTCCCTGGAACTATCCTCTATTGATGTCTACATGGAAAGTTGCACCTGCCTTGGCTGCTGGGTGTGCTGCAATCCTGAAGCCATCAGAACTGGCATCTGTCACCTCTTTGGAATTGGGCGAAATCTGTGAAGATGTTGGTCTTCCATCTGGTGTTTTGAATATTCTGACAGGATTTGGCCCTGAAGCTGGTGCTCCTCTAGCATCTCATCCTCACGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACGGGAAGCAAGATTATGACAGCAGCTGCTCAACTTGTCAAGCCTGTTACCATGGAACTTGGTGGAAAAAGTCCAATTGTTGTTTTTGATGATGTCGACCTTGACAAGGCTGCCGAATGGACAGCATTTGGTTGCTTTTGGACAAATGGCCAGATTTGCAGTGCCACATCCCGTCTACTTGTACATGAAAACATTGCTGATGAATTCTTGGATAGGCTCGTGAAATGGTGCCAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGGCTTGGCCCTGTTGTTAGTGCAGGACAGTATGAGAAAATATTGAAGTTTGTCTCAACTGCTGAGCACGAAGGTGCAAAGATTCTATATGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCGTTGAACCAGCCATTATTACTAATGTTACAACCTCCATGCAAATATGGAAAGAAGAAGTCTTTGGACCTGTTCTGTGTGTGAAGACTTTTAGTTCTGAAGATGAAGCTATCGAATTAGCAAATGATACAATATATGGGCTAGGTGCTGCTGTAATATCAAATGATTTAGAAAGGTGTGATCGCGTAGCCAAGGCTTTACAGGCAGGAATTGTGTGGGTTAATTGCTCGCAACCATGCTTCACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAGCTAGGGGAATGGGGACTTGATAATTATCTAACTGTAAAGCAGGTTACTCAATATATATCCGACGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA 1512 45.77 MAIPIPSRQLFIDGEWREPVLKNRIPIINPTTEETIGSIPAATAEDVELAVDAARKALARNKGKDWASAPGAHRAKYLRAIAAKITERKSELAKLEAIDCGKPLEEAAWDMDDVAGCFEYYADLAEGLDAKQNAPVSLPMDTFKSYVRKEPIGVVGLITPWNYPLLMSTWKVAPALAAGCAAILKPSELASVTSLELGEICEDVGLPSGVLNILTGFGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTMELGGKSPIVVFDDVDLDKAAEWTAFGCFWTNGQICSATSRLLVHENIADEFLDRLVKWCQNIKISDPLEEGCRLGPVVSAGQYEKILKFVSTAEHEGAKILYGGVRPKHLKKGYFVEPAIITNVTTSMQIWKEEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCDRVAKALQAGIVWVNCSQPCFTQAPWGGNKRSGFGRELGEWGLDNYLTVKQVTQYISDEPWGWYKSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32007170 32011890 - CePI673135_06g018670.1 Cec06g1867 206604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1867 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491(InterPro)
Cec06g1867 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620(InterPro)
Cec06g1867 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491(InterPro)
Cec06g1867 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Cec06g1867 503 Pfam Aldehyde dehydrogenase family 20 485 IPR015590 GO:0016491(InterPro)
Cec06g1867 503 CDD ALDH_F10_BADH 27 487 - -
Cec06g1867 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Cec06g1867 503 SUPERFAMILY ALDH-like 5 489 IPR016161 GO:0016491(InterPro)
Cec06g1867 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491(InterPro)
Cec06g1867 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0463 Cec-Chr6:5217173 Cec06g1867 Cec-Chr6:32007170 3.50E-57 dispersed
Cec06g1867 Cec-Chr6:32007170 Cec06g1889 Cec-Chr6:32192958 1.20E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1867 K00130 - csv:101213657 949.888