Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1870 ATGGCTTTCTTTCCTCCTCCCGCTTTCCTTTTTGCAATTTTGCTGTCTATTGTTCCATTCTCAGTTGAATCGAAACTTTCTCTTGATTATTACCAGAAAACTTGCCCCGATTTTGCCAGAATCGTCAGTGAAACCGTCGCTAACAAGGTGGCTTCTAGCCCAACCACCGCCGCCGCAACTATGCGTCTCTTCCTCAATGATTGTTTAGTTGGAGGTTGCGATGGCTCTGTTCTCGTTGCTTCTAACGCCTTCAATCACGCCGAGCGCGATGCTGAAATCAATCTTTCTCTTCCAGGAGACGCGTTCGACGTCGTCGCTCGATCGAAGATCACCTTAGAGCTTTCTTGCCCCGGGATCGTCTCTTGTTCCGACGTATTAGCACAAGCGACTCGCGATCTCATCGCGATTGCAGGCGGACCGTCGTACAATGTTCAATTAGGGCGAAAAGACAGCCTGGTATCGAAATCTTCCGAAGTGGAAGGCAATATTCCGAAGGCGAATCAAACAATTGACGAGATGATTAAGCTATTCACGTCGAAAGGATTCACGATTCAAGAAATGGTAGCGTTGTACGGCGGACGAACAATCGGATTCTCAAATTGCAAGGAATTCAGCGATCGTATCTTCAAGTTTAGCAAGGAAACACCAACAGATCCAGAGATTCATCCAAAGTTTGCAGAGGCTTTGAAAAAGACTTGCGAAGGATATGAGAAGAATCCGGGAATGTCGGCTTACAGTGACGCCGTAACGCCGGGGAAATTCGATAATGTGTATTACCAGAATCTGCTTAGGGGAATGGGGTTATCGGCGTCGGATCATGCGTTGGTGAAGGATCCGAGAACGAGGAAATTCGTGGAGATGTACGCCGGAAATCAAGCGTTGTTCTTCAAGGATTTTGCACACGCCATGGAGAAGATGAGCGTTCGTGAAGTGAAAACCGGTGGGAAAGGAGAAGTGAGGAGGAAATGCGATGTGTTCAATGAAATCCACACTTGA 996 47.39 MAFFPPPAFLFAILLSIVPFSVESKLSLDYYQKTCPDFARIVSETVANKVASSPTTAAATMRLFLNDCLVGGCDGSVLVASNAFNHAERDAEINLSLPGDAFDVVARSKITLELSCPGIVSCSDVLAQATRDLIAIAGGPSYNVQLGRKDSLVSKSSEVEGNIPKANQTIDEMIKLFTSKGFTIQEMVALYGGRTIGFSNCKEFSDRIFKFSKETPTDPEIHPKFAEALKKTCEGYEKNPGMSAYSDAVTPGKFDNVYYQNLLRGMGLSASDHALVKDPRTRKFVEMYAGNQALFFKDFAHAMEKMSVREVKTGGKGEVRRKCDVFNEIHT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32040904 32041899 - CePI673135_06g018700.1 Cec06g1870 206607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1870 331 Gene3D Peroxidase, domain 2 164 306 - -
Cec06g1870 331 PANTHER - 13 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 FunFam Peroxidase 164 306 - -
Cec06g1870 331 Pfam Peroxidase 42 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 FunFam Peroxidase 29 175 - -
Cec06g1870 331 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 Gene3D - 29 327 - -
Cec06g1870 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1870 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1870 Cec-Chr6:32040904 Cec11g0735 Cec-Chr11:8320099 5.60E-73 dispersed
Cec01g1280 Cec-Chr1:23254299 Cec06g1870 Cec-Chr6:32040904 1.80E-31 wgd
Cec01g1491 Cec-Chr1:29556387 Cec06g1870 Cec-Chr6:32040904 1.70E-122 wgd
Cec10g1471 Cec-Chr10:29108422 Cec06g1870 Cec-Chr6:32040904 6.10E-104 wgd
Cec06g1870 Cec-Chr6:32040904 Cec09g1986 Cec-Chr9:36882419 5.80E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1870 K00430 - csv:101213178 587.03