Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1872 ATGTTGGTCTTTTTAGTTCATTGCAATCTTCGCCAATACCATCGCATCGTCTTGTATCTGTATGTCTTCTGGCCTCCTATGTTGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTCCGGCGGATGGTGATAATCCCGATGATAAGCGTAAAAAGTTTTGTTTATGGAGCGTGGTTCGTGATGCCACATCATTGCAATCAATGCAACAACTATTGGAGCCAGTCATTCGTAAAGTGGTAAGGGAGGAGATTGAGTCGGCACTAAGAAAGTACATTACCAATGTGCAAAGGAATGACGCGAATGATGGGAAAGAAATGTATTCTTCCGGGCCGAGATGCTTTCAATTGAAGTTCATAACTGATATTTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGATGGTGGCTTTGGTTGACACCTTAACTGGGGAAGTTGTTGGCACTGGGACTCAATCCTCAGCCAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAAGTAATAGTTACACTGCAGAGGAGTTCAAGAATAACATTGTAAGAGAGAGGGAAGGGAAGAAACCACTTCTTACAGGAGATACATGTGTGAGTCTCAAAGATGGCATTGGTTTGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTCGGTGCAAGAATTATAGACGACAATGATGGAACGAGAATACTGGAAGCAAAGACTGCGTCATTTGTGGTCAGAGATCACCGTGGAGAATTGTACAAAAAGCACCACCCTCCATTTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGCCTATCATAAGCGCCTGAGCCAAGAAAAAATTGAGACAGTGAAAGATTTCCTTACTCTGCTTTATATACAACCTTCAAGGCTTCGTAATATTCTTGGCCCTGGCATGTCTACGAAAATGTGGGAAACTACAATTGAGCATGCACAGACATGTGTGCTCGATCGGAAGATTTATGTCTACAATCCTCGTGATTTGGAACAGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATCACCAGTACGTTCCCATAGATAAGCTATCTGAAAGTGAAAAGGCTGATGCTCATAACTTGGTTATCTCTGCGTACAAACACTGGGAAGAAGTCAACTCCATTGATGATGAAACTTCTCTTGTGGGTGGCTCTTCTCACCCACTCAGTTTCCTTTACACCCCCAGCTCACCCATGGAGGACCATTATGGTAGCAAGTACTTGGCTTCTCCAAAATTTAGTGGTTTTGATTTCACACCATCAAATGTCTATTCGTCTGACATAATTTCATCGATGGGTTCTATTGGGAATCCTAGCAGCCTGGACGATCATGCTTTGCAGGGTTTTGATTCTATGGTTGTAAGATATGATCAGATACCAAGTTCCCCAAACTTTGCCAACTCTTCTCTGATCTGCGATTCCGAGCCACTAAACTCATCTTTCTTTGATGTGGATCATATGCAAGTTTTAGAGTCTGATTTGCAATGCAGCTCGATTTTAGAATCACGAGCAATTACAACAACTCTTCAAGGTGGCTCCTCATCATGTGGTGCTCAAATGAGATGGGCTAAATTATATGGTGTGCTAAAATGGTATATTTTGTTGAGGTTGGTAATTAGGAGAAACAAACGCGGGTTCAAGAGATACAAAGTTTTGTTCTTCCAAGTGTTTTGGTTATGCTATGTCTCTGAGCCAGAAGATTTTTTTCTCTCTGATTCAAGTGTTTGTACATTGGTGTAG 1830 42.57 MLVFLVHCNLRQYHRIVLYLYVFWPPMLSQKRNPDDGDGPADGDNPDDKRKKFCLWSVVRDATSLQSMQQLLEPVIRKVVREEIESALRKYITNVQRNDANDGKEMYSSGPRCFQLKFITDISLPVFTGARIEGRDGSNLMVALVDTLTGEVVGTGTQSSAKVEIVVLEGDFEGGSNSYTAEEFKNNIVREREGKKPLLTGDTCVSLKDGIGLVGEISFTDNSSWTRSRRFRLGARIIDDNDGTRILEAKTASFVVRDHRGELYKKHHPPFLQDEVWRLQKISKDGAYHKRLSQEKIETVKDFLTLLYIQPSRLRNILGPGMSTKMWETTIEHAQTCVLDRKIYVYNPRDLEQKSGVVFNVVGQVMGLLSDHQYVPIDKLSESEKADAHNLVISAYKHWEEVNSIDDETSLVGGSSHPLSFLYTPSSPMEDHYGSKYLASPKFSGFDFTPSNVYSSDIISSMGSIGNPSSLDDHALQGFDSMVVRYDQIPSSPNFANSSLICDSEPLNSSFFDVDHMQVLESDLQCSSILESRAITTTLQGGSSSCGAQMRWAKLYGVLKWYILLRLVIRRNKRGFKRYKVLFFQVFWLCYVSEPEDFFLSDSSVCTLV 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32055383 32060792 + CePI673135_06g018720.1 Cec06g1872 206609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1872 609 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
Cec06g1872 609 PANTHER OS02G0177800 PROTEIN 52 567 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cec06g1872 609 Pfam Calmodulin binding protein C-terminal domain 342 404 IPR046829 -
Cec06g1872 609 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1821 Cec-Chr3:36466579 Cec06g1872 Cec-Chr6:32055383 8.00E-41 dispersed
Cec03g1822 Cec-Chr3:36482160 Cec06g1872 Cec-Chr6:32055383 1.10E-51 dispersed
Cec06g1517 Cec-Chr6:28690923 Cec06g1872 Cec-Chr6:32055383 2.70E-92 dispersed
Cec06g1872 Cec-Chr6:32055383 Cec02g1598 Cec-Chr2:33538004 1.40E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1872 - - - 0.0