Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1886 ATGATAATCTCATTTCAGGTTTTTGGTTCTCTGTCCTTTCATTGTACTGTGGAAAAGCATTCTTGCTTGAGTTTGTTAGAGTTATCATCCACGGATATGTTGGATTTTCCTCATACACCAAGAACGGTTCCACGGGTGATGACTGCTTCAGGAATATTTTCGGATAAGGACAGCGATTTGGAAGTTTCCTCATCTAAATGCAGAGGGAGAAAAATTATAGTGGCAAATTTTCTCCCTCTTAATGCTAAAAAGGATCCAGATTCTGGAAAATGGAAATTCAGTTTTGATGAGGATTCAATTTTGCTTCAGCTGAAGGATGGCTTCTCACCTGATGTAGATGTTATATATGTTGGATCATTAAAGGTCGATGTTGATGTCCGAGAGCAAGATGAGGTTTCTCAGAAACTGCTGGAGGAATTCAACTGCGCACCGACTTTCATTCCTGCATACCTTCAGAAACAGTACTATCATGGATTCTGCAAGCAACATTTGTGGCCACTTTTTCATTACATGATGCCAATTTCCCCTTATCACGGATCTCGCTTTGATCGACATCTCTGGCAAGCGTATCTTTCAGTCAACAAAAGGTTTGCAGATAAAGTGATGGAGGTAATCAATCTTGAAGAAGATTATGTCTGGATTCATGATTATCACCTTATGGTTCTCCCTACTTTTTTGAGAAAACGCTACAGTCGAATTAAGCTCGGATTCTTCCTTCATAGTCTGTTTCCCTCATCAGAAATCTATCGAACTCTCCCTGTTAGAGATGAGATTCTGAGAGCATTACTTAACGTAGACCTAATCGGTTTCCATACATTCGATTATGCTCGCCACTTCCTATCTTGTTGTAGTAGACTGCTTGGTCTGGAGTATGAATCTAAACGTGGATATCTCACGCTTGAGTATTTTGGCCGTACGATATACATCAAGATTTTGCCTGTTGGAGTTCATATAGGTCGACTTGAATCTGCATTAAACCAACCGTACACTTCAATGAAGGTCAAGGAAATCAAAGAAAATCTCGAAGGAAAGAAACTTATTCTTGGTGTTGATGACATGGACATCTTTAAAGGTATTGGTCTGAAGTTATTAGCTATGGAACAGCTCTTGAAACAGCATCCAGAGTTAAGGGGCAATGTTGTTCTGGTGCAAATTCTAAATCCGGCACGGAGCAATGGGAATGATGTCCAGGAAGCAAAACGGGAAACTTATGAGATAACCAAAAGGATTAACAAGGTTTTTGGTTGTCCGGGATATGAACCTGTAATCTTGATTGATCATCCTATTCCTCCTCACGAGAAGATTGCATATTATGTATTAGCAGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCGTATGAGTACATTGTTTGTCGACAGGGAACTTCAAAAATGGATGAACTCTTGGAAGTCTCCCCGAATTCACCTCGTACCAGCACGATTGTCGTGTCCGAATTTATAGGTTGTTCACCATCTCTAAGTGGTGCAGTCAGGGTAAACCCCTGGGATTTTGATGCCGTAGCTGATGCACTTTATGCAGCTGTCACCATGCCTGCTTTAGAAAAGCAACTGAGGCACGAAAAGCATTACCGATATATTAGCTCTCACGATGTTGCTTACTGGGCTCGCAGTTTCTCACAAGATTTGGAGCGAGCATGCCGAGAACACTACAGTAAACGATGCTGGGGCATTGGTTTTGGTTTAGGTTTCAGAATTTTGTCACTCTCTCCAAGTTTCAGGAAGCTTTCCATTGAACACATTGGCTCTGCATATAGAAGCGCCTCTAGGAGGGCAATATTTCTGGATTACGATGGGACTGTGGTTTCTGAAACTTCGTTGGTTAAATCTCCGTCACTTGAAGTCATTTCTATCATCAACAACCTTTGCACGGATTCAAAGAACACTGTTTTTATAGTTAGTGGCAGGGGGAAAGATTCTCTCGGTTCATGGTTCGATTCGTGTAAGAATCTAGGTATTGCTGCTGAACATGGATACTATTTGAGGTGGAATAAGGATTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTTTGTTGGAAAAGGATTGCAGAACCAGTGATGAAACTATATACTGAGGCCACAGATGGCTCATACATTGAGACCAAGGACAGTGCGTTGGTATGGCACCATCAGGACGCTGACCCTTATTTTGGTTCATGTCAGGCCATGGAGCTTTTGGACCACCTTGAAAATGTCCTTGCCAATGAACCCGTAGTTGTTAAAAGAGGTCAGCAGATCGTTGAAGTTAAACCTCAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGATCAACTCGAATAAAGCACCGGACTTTGTGTTGTGCATTGGAGATGATCGATCCGACGAAGACATGTTCGAGAGCATATCTAGCATAAGCTATAGCTCATCCCTTGCCAGCCCCCCAAAGATATTTGCCTGTACTGTGGGGCAAAAGCCTAGTAAAGCCAAATACTATTTAGATGATACCACCGACGTTTTGACCTTGCTTCAAAGCCTGGCCACCCCTTCTACACGTAAACTGAGGCCAAGTTTTGAAACTCGTGTTTTGTTCGAGGAGGATATCAAACTGGAGAACACACCTTTACTGAGTCGGGATCGTCTCGATTGCCCGACTCTTTGCCACAGTCACTGGTGCCAATGGGTTGAATTCAGGAAGATAATTGCTTGGCTAGAATATAGTGAACAGGTTTCAGATACAAATTACAATTAG 2760 42.03 MIISFQVFGSLSFHCTVEKHSCLSLLELSSTDMLDFPHTPRTVPRVMTASGIFSDKDSDLEVSSSKCRGRKIIVANFLPLNAKKDPDSGKWKFSFDEDSILLQLKDGFSPDVDVIYVGSLKVDVDVREQDEVSQKLLEEFNCAPTFIPAYLQKQYYHGFCKQHLWPLFHYMMPISPYHGSRFDRHLWQAYLSVNKRFADKVMEVINLEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILRALLNVDLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHIGRLESALNQPYTSMKVKEIKENLEGKKLILGVDDMDIFKGIGLKLLAMEQLLKQHPELRGNVVLVQILNPARSNGNDVQEAKRETYEITKRINKVFGCPGYEPVILIDHPIPPHEKIAYYVLAECCIVNALRDGMNLVPYEYIVCRQGTSKMDELLEVSPNSPRTSTIVVSEFIGCSPSLSGAVRVNPWDFDAVADALYAAVTMPALEKQLRHEKHYRYISSHDVAYWARSFSQDLERACREHYSKRCWGIGFGLGFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSETSLVKSPSLEVISIINNLCTDSKNTVFIVSGRGKDSLGSWFDSCKNLGIAAEHGYYLRWNKDSDWEVSPLAENFCWKRIAEPVMKLYTEATDGSYIETKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMINSNKAPDFVLCIGDDRSDEDMFESISSISYSSSLASPPKIFACTVGQKPSKAKYYLDDTTDVLTLLQSLATPSTRKLRPSFETRVLFEEDIKLENTPLLSRDRLDCPTLCHSHWCQWVEFRKIIAWLEYSEQVSDTNYN 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32150692 32154817 - CePI673135_06g018860.1 Cec06g1886 206623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1886 919 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 601 718 - -
Cec06g1886 919 CDD HAD_TPP 603 842 - -
Cec06g1886 919 CDD GT20_TPS 70 555 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cec06g1886 919 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 40 851 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cec06g1886 919 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 63 322 - -
Cec06g1886 919 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 559 - -
Cec06g1886 919 Gene3D - 601 716 IPR023214 -
Cec06g1886 919 Gene3D - 731 860 IPR023214 -
Cec06g1886 919 NCBIfam trehalose-phosphatase 599 850 IPR003337 GO:0005992(InterPro)
Cec06g1886 919 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 731 862 - -
Cec06g1886 919 Pfam Trehalose-phosphatase 605 839 IPR003337 GO:0005992(InterPro)
Cec06g1886 919 Pfam Glycosyltransferase family 20 70 555 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cec06g1886 919 NCBIfam HAD-IIB family hydrolase 603 804 IPR006379 -
Cec06g1886 919 FunFam Alpha,alpha-trehalose-phosphate synthase 324 539 - -
Cec06g1886 919 SUPERFAMILY HAD-like 602 850 IPR036412 -
Cec06g1886 919 Gene3D Glycogen Phosphorylase B; 323 539 - -
Cec06g1886 919 Gene3D Glycogen Phosphorylase B; 63 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1886 Cec-Chr6:32150692 Cec10g0149 Cec-Chr10:1447625 0.00E+00 dispersed
Cec05g2747 Cec-Chr5:37948522 Cec06g1886 Cec-Chr6:32150692 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1886 K16055 - csv:101209676 1635.93