Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1889 ATGGCTGCTCGTAGAGGAATCTGTTCTTTACTCTCTCGTTCTCTCTTATCTTCTTTCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTATGGGTTTAGTTCGTTTCTTCAATCTCATGGAAGAGTTTCAAGGTTCCAAAGAAGAGGGAATAGATTTAGCACATCTGCTTTGGCAGAGGAGGAACTCATCACTCCTCCTGTTCAGATCAATTACACTCAAAATCTGATTAATGGGCAGTTTGTAGATGCTGCATCAGGAAAAACGTTTCCGACTTACGATCCTCGCACTGGGGAAGTGATTGCTCATGTTGCCGAGGCCGATGCCGAGGATATTAACCGTGCGGTATCAGCAGCTCGAAAGGCATTTGACGAGGGGCCATGGCCGAGAATGACTGCTTATGAACGATCAAGGATATTACTGCGATGTGCAGATTTGATTGAGAAACATATGTCTGAACTTGCAGCATTGGAAACATGGAACAATGGGAAACCTTACGAACAATCAGTTAAATCCGAATTACCGTTACTCGTGCGCTTGTTTCACTATTACGCTGGCTGGGCAGACAAAATCCATGGCTTAACAGTTCCAGCTGATGGAAATCATCATGTGCAAGTATTACATGAACCAATTGGAGTAGCAGGACAGATAATTCCATGGAACTTTCCTCTCATTATGTTTGCTTGGAAAGTTGGTCCTGCTTTAGCCTGTGGCAACACTGTTGTCCTAAAGACTGCAGAGCAAACACCTCTGACTGCTCTTTATGTCGCTAAGTTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTAAATGTCGTTTCGGGCTATGGTCCGACGGCCGGTGCTGCCCTTGCTAGCCATATGGATGTGGACAAGCTAGCTTTCACCGGATCAACGAGCACAGGAAAAGTTGTACTTGAATTGGCAGCAAAAAGCAATTTGAAGCCAGTGACACTAGAGCTTGGAGGGAAATCACCTTTCATTGTTTGTGAGGATGCAGATGTTGATAAGGCTGTGGAGCTTGCTCATTTTGCTCTTTTTTTCAATCAGGGGCAATGTTGTTGTGCCGGATCTCGTACTTTTGTTCATGAGCGTGTATACGATGAATTTGTCGAAAAATCGAGGGTACGTGCCCAAAGACGTGTTGTTGGTGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGAGCAATTCGAAAAAGTCCTAAGATACATCAAATCTGGCATTGAAAGTGATGCTACTTTGGAATGTGGTGGTGGTAGACTTGGGTCCAAGGGATACTTCATCGAGCCAACAGTTTTCTCAAATGTTAAGGATGATATGTTGATAGCGAAAGATGAAATCTTTGGTCCAGTACAATCCATCTTGAAATTCAAGGACATTGATGAAGTAATTCAAAGGGCAAACTCTACTCGTTACGGTCTAGCTTCGGGAGTTTTCACATCGAACATCGACACAGCCAACACACTAACACGAGGATTGAGAACGGGAACCGTGTGGCTCAATTGCTTTGACATCTTCGACGCTGCAATACCGTTTGGTGGGTATAAAATGAGTGGAATAGGAAGGGAGAAGGGAATTTACAGCCTCCAAAGCTACTTGCAAGTAAAAGCTGTTGTTACACCTCTCAAGAATCCAGCATGGTTGTGA 1668 44.42 MAARRGICSLLSRSLLSSFSASSSSSSSSSSAYGFSSFLQSHGRVSRFQRRGNRFSTSALAEEELITPPVQINYTQNLINGQFVDAASGKTFPTYDPRTGEVIAHVAEADAEDINRAVSAARKAFDEGPWPRMTAYERSRILLRCADLIEKHMSELAALETWNNGKPYEQSVKSELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKSRVRAQRRVVGDPFKKGVEQGPQIDSEQFEKVLRYIKSGIESDATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIQRANSTRYGLASGVFTSNIDTANTLTRGLRTGTVWLNCFDIFDAAIPFGGYKMSGIGREKGIYSLQSYLQVKAVVTPLKNPAWL 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32192958 32196107 + CePI673135_06g018890.1 Cec06g1889 206626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1889 555 Pfam Aldehyde dehydrogenase family 83 545 IPR015590 GO:0016491(InterPro)
Cec06g1889 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 89 545 IPR016162 GO:0016491(InterPro)
Cec06g1889 555 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 54 547 - GO:0004029(PANTHER)
Cec06g1889 555 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 321 328 IPR029510 GO:0016491(InterPro)
Cec06g1889 555 CDD ALDH_F2BC 72 547 - -
Cec06g1889 555 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 79 347 - -
Cec06g1889 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 327 516 IPR016163 GO:0016620(InterPro)
Cec06g1889 555 SUPERFAMILY ALDH-like 71 549 IPR016161 GO:0016491(InterPro)
Cec06g1889 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 349 360 IPR016160 GO:0016491(InterPro)
Cec06g1889 555 FunFam Mitochondrial aldehyde dehydrogenase 2 327 516 - -
Cec06g1889 555 FunFam Aldehyde dehydrogenase, putative 517 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1743 Cec-Chr2:35237170 Cec06g1889 Cec-Chr6:32192958 5.20E-246 dispersed
Cec02g1968 Cec-Chr2:37516053 Cec06g1889 Cec-Chr6:32192958 6.70E-80 dispersed
Cec06g1171 Cec-Chr6:23663262 Cec06g1889 Cec-Chr6:32192958 7.50E-162 dispersed
Cec06g1867 Cec-Chr6:32007170 Cec06g1889 Cec-Chr6:32192958 1.20E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1889 K00128 - csv:101209430 1005.36