Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1923 ATGGTGGGCTCGGTAGGGTTGTGTCAGCCTAGCCTAGTTGAAATGTACAGGGTTTTGCTTCACTCTTCTTCATCAGATCAGCTCTTAAACCAAACCTCAAAAATTTTTAGTTTATCAAAAGGAAAGGAAGAAAAGGGGTCTAAAGCTTTCTTACCTGAAAGGGCAAGGATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCTGGTTGCATTTTTGCTCCTTATTTCCCACCGGAAGAGCCTCAAAAGTTTGCCAATGTGCATAAAATCTTTGGGGCCAGCAATGTCACAAAGCTACTAAATGAGCTTCTACCTCACCAAAGAGAGGATGCTGTGAACTCTCTTGCCTATGAGGCTGAGGCCCGAGTTCGGGACCCGGTCTACGGTTGCGTCGGAGCCATCTCCTTCCTCCAAAGGCAAGTTCAAAGGCTCCAAAAGGAACTCGACGCTGCGAATGCTGACCTAATTCGGTTCGCATGCAACGAGATACCTAATGCAGGAGTGAGTCAAGTGGTTCAGCCCAACCTTGGCGCTCGCCCGAGAGCGTTAGATCAATATCACACAAGTTCATCAACAAGTGGATATTATAATCAACATCTTCCTGCTTTTCCCATGGCTTATCCATTGCCTTGGAATGAAAACTCTTCTGGAAATAACATCAATGAAGGAGGAGGAGATGGCAATATTTGA 723 45.5 MVGSVGLCQPSLVEMYRVLLHSSSSDQLLNQTSKIFSLSKGKEEKGSKAFLPERARMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIPNAGVSQVVQPNLGARPRALDQYHTSSSTSGYYNQHLPAFPMAYPLPWNENSSGNNINEGGGDGNI 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32617791 32620706 - CePI673135_06g019230.1 Cec06g1923 206660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1923 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 64 184 - -
Cec06g1923 240 Pfam Lateral organ boundaries (LOB) domain 66 163 IPR004883 -
Cec06g1923 240 Coils Coil 145 172 - -
Cec06g1923 240 ProSiteProfiles LOB domain profile. 65 166 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1923 Cec-Chr6:32617791 Cec11g1157 Cec-Chr11:23600517 1.10E-46 dispersed
Cec09g0066 Cec-Chr9:560485 Cec06g1923 Cec-Chr6:32617791 7.10E-22 transposed
Cec01g1438 Cec-Chr1:29030843 Cec06g1923 Cec-Chr6:32617791 1.00E-51 wgd
Cec10g1403 Cec-Chr10:28374804 Cec06g1923 Cec-Chr6:32617791 6.20E-56 wgd
Cec06g1923 Cec-Chr6:32617791 Cec09g2038 Cec-Chr9:37418146 1.80E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29843 PF03195 LOB 5.30E-42 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1923 - - - 0.0