Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g1923 | ATGGTGGGCTCGGTAGGGTTGTGTCAGCCTAGCCTAGTTGAAATGTACAGGGTTTTGCTTCACTCTTCTTCATCAGATCAGCTCTTAAACCAAACCTCAAAAATTTTTAGTTTATCAAAAGGAAAGGAAGAAAAGGGGTCTAAAGCTTTCTTACCTGAAAGGGCAAGGATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCTGGTTGCATTTTTGCTCCTTATTTCCCACCGGAAGAGCCTCAAAAGTTTGCCAATGTGCATAAAATCTTTGGGGCCAGCAATGTCACAAAGCTACTAAATGAGCTTCTACCTCACCAAAGAGAGGATGCTGTGAACTCTCTTGCCTATGAGGCTGAGGCCCGAGTTCGGGACCCGGTCTACGGTTGCGTCGGAGCCATCTCCTTCCTCCAAAGGCAAGTTCAAAGGCTCCAAAAGGAACTCGACGCTGCGAATGCTGACCTAATTCGGTTCGCATGCAACGAGATACCTAATGCAGGAGTGAGTCAAGTGGTTCAGCCCAACCTTGGCGCTCGCCCGAGAGCGTTAGATCAATATCACACAAGTTCATCAACAAGTGGATATTATAATCAACATCTTCCTGCTTTTCCCATGGCTTATCCATTGCCTTGGAATGAAAACTCTTCTGGAAATAACATCAATGAAGGAGGAGGAGATGGCAATATTTGA | 723 | 45.5 | MVGSVGLCQPSLVEMYRVLLHSSSSDQLLNQTSKIFSLSKGKEEKGSKAFLPERARMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIPNAGVSQVVQPNLGARPRALDQYHTSSSTSGYYNQHLPAFPMAYPLPWNENSSGNNINEGGGDGNI | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 32617791 | 32620706 | - | CePI673135_06g019230.1 | Cec06g1923 | 206660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g1923 | 240 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 64 | 184 | - | - | |
Cec06g1923 | 240 | Pfam | Lateral organ boundaries (LOB) domain | 66 | 163 | IPR004883 | - | |
Cec06g1923 | 240 | Coils | Coil | 145 | 172 | - | - | |
Cec06g1923 | 240 | ProSiteProfiles | LOB domain profile. | 65 | 166 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g1923 | Cec-Chr6:32617791 | Cec11g1157 | Cec-Chr11:23600517 | 1.10E-46 | dispersed | |
Cec09g0066 | Cec-Chr9:560485 | Cec06g1923 | Cec-Chr6:32617791 | 7.10E-22 | transposed | |
Cec01g1438 | Cec-Chr1:29030843 | Cec06g1923 | Cec-Chr6:32617791 | 1.00E-51 | wgd | |
Cec10g1403 | Cec-Chr10:28374804 | Cec06g1923 | Cec-Chr6:32617791 | 6.20E-56 | wgd | |
Cec06g1923 | Cec-Chr6:32617791 | Cec09g2038 | Cec-Chr9:37418146 | 1.80E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29843 | PF03195 | LOB | 5.30E-42 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g1923 | - | - | - | 0.0 |