Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1938 ATGGAAGCTGGGAGTAGATTCTACTCTGCTACGGATGAGTTCAGATTGGAAGGCAACTGGTTGGTTGACCCCAGGCATCTTTTCGTTGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGCTGATGAGGTTGCAAAGAAAGAGGCTCGGTTTGCTCGAGAAGTTGCAATGCTGTCTAAAGTACAACATAAGAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACCGAGCTTTTATTAGGAGGAACCTTACGAAAGTACCTGCTCAACATGCGCCCACGGTGCTTGGACACACGCATAGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGTCTTCACTCACATGGCATCATACACCGTGATCTGAAACCTGAGAACCTTCTGTTGACTGCAGATCACAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCAGAGACGGGGACATACCGTTGGATGGCTCCAGAGTTGTACAGCACTGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCTATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCAGCATATGCAGCTGCTTTTAAGAATGTTAGGCCTAGCGCAGAGAATATTCCAGAGGAACTGGCTATCATTCTAACATCATGCTGGCAGGAGGATGCAAATGCTCGTCCAAATTTCACCCAAATAATCCAAATGTTACTTAATTACCTTTATACCATTTCACCCCCCGAGCCGATGATACCTTCCCGAATTTTCTCTTCTGAGAACACTGTTTTTCCTCCTGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGTGACGATTCAGGGGACACTCCAAAAGCTAAGATGGAAAATAATCCCAGAGGTTGTTTCTTCTGCTCCAATGACTGTTACTAA 1062 44.63 MEAGSRFYSATDEFRLEGNWLVDPRHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETADEVAKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRIAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENIPEELAIILTSCWQEDANARPNFTQIIQMLLNYLYTISPPEPMIPSRIFSSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENNPRGCFFCSNDCY 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32730833 32733063 + CePI673135_06g019380.1 Cec06g1938 206675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1938 353 PANTHER SERINE-THREONINE PROTEIN KINASE 24 288 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec06g1938 353 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 SMART serkin_6 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 MobiDBLite consensus disorder prediction 315 336 - -
Cec06g1938 353 Pfam Protein tyrosine and serine/threonine kinase 32 287 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 FunFam Kinase suppressor of Ras 1 16 106 - -
Cec06g1938 353 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Cec06g1938 353 Gene3D Transferase(Phosphotransferase) domain 1 108 296 - -
Cec06g1938 353 SUPERFAMILY Protein kinase-like (PK-like) 20 316 IPR011009 -
Cec06g1938 353 CDD STKc_MAP3K-like 33 287 - -
Cec06g1938 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524(InterPro)
Cec06g1938 353 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1938 353 FunFam serine/threonine-protein kinase HT1 108 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1938 Cec-Chr6:32730833 Cec11g1164 Cec-Chr11:23849824 2.40E-61 dispersed
Cec04g1630 Cec-Chr4:35622314 Cec06g1938 Cec-Chr6:32730833 9.60E-78 transposed
Cec10g2271 Cec-Chr10:36947823 Cec06g1938 Cec-Chr6:32730833 5.50E-117 transposed
Cec10g1393 Cec-Chr10:28233276 Cec06g1938 Cec-Chr6:32730833 2.00E-160 wgd
Cec06g1938 Cec-Chr6:32730833 Cec09g2044 Cec-Chr9:37494793 5.30E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72111 PF07714 PK_Tyr_Ser-Thr 3.10E-58 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1938 - - - 0.0