Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec06g1942 | ATGGAGACTCTTCTTCATCATCTTCTTTCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACCTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCGCCATGGTCCTCTGTTTCTTCTCCGCCTCGGCTCTGTTCCCACCATCGTCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTAGCCACAAGCTTCTTTACAGCTCAAGAGACATAGCCGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTACAAGGGAAGAAGAAGTCAAATGCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTGATTTGCAGAGTGGGTTTAGGGAGAAAATATGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATTGGAATTTGGGCAATTATTGGGGACTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCCAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAATTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAAGGGTGCTATGTAAACGAGGATGATTTAAACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTGGTCCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACATTAAACGTGGGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCAACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCATATGTTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAGTTCCTAACAAAGGAATGAAACTATAG | 1533 | 42.47 | METLLHHLLSLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARRHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLVFANRPKSTISHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSTREEEVKCMIEKIQHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLLEFGQLLGTFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKGCYVNEDDLNKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDIKRGTRVMINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMFEWILPNGEDLDMTGTFGLTIHRKFPLVATAVPNKGMKL | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 32760195 | 32762163 | + | CePI673135_06g019420.1 | Cec06g1942 | 206679 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec06g1942 | 510 | PANTHER | CYTOCHROME P450 71B11-RELATED | 21 | 501 | IPR050193 | - | |
| Cec06g1942 | 510 | Gene3D | Cytochrome P450 | 37 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | CDD | CYP71-like | 72 | 498 | - | - | |
| Cec06g1942 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec06g1942 | 510 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 94 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | FunFam | Cytochrome P450 83B1 | 30 | 501 | - | - | |
| Cec06g1942 | 510 | SUPERFAMILY | Cytochrome P450 | 43 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g1942 | 510 | Pfam | Cytochrome P450 | 43 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g0311 | Cec-Chr3:3539007 | Cec06g1942 | Cec-Chr6:32760195 | 2.00E-106 | dispersed | |
| Cec03g0314 | Cec-Chr3:3575715 | Cec06g1942 | Cec-Chr6:32760195 | 1.90E-123 | dispersed | |
| Cec03g0315 | Cec-Chr3:3589367 | Cec06g1942 | Cec-Chr6:32760195 | 8.30E-126 | dispersed | |
| Cec05g2835 | Cec-Chr5:38607187 | Cec06g1942 | Cec-Chr6:32760195 | 7.20E-112 | dispersed | |
| Cec06g1942 | Cec-Chr6:32760195 | Cec07g1532 | Cec-Chr7:30916602 | 3.70E-100 | dispersed | |
| Cec10g1748 | Cec-Chr10:32168949 | Cec06g1942 | Cec-Chr6:32760195 | 5.30E-83 | dispersed | |
| Cec10g1749 | Cec-Chr10:32176480 | Cec06g1942 | Cec-Chr6:32760195 | 2.00E-80 | dispersed | |
| Cec02g0799 | Cec-Chr2:9489039 | Cec06g1942 | Cec-Chr6:32760195 | 7.80E-37 | transposed | |
| Cec02g1995 | Cec-Chr2:37798934 | Cec06g1942 | Cec-Chr6:32760195 | 1.60E-66 | transposed | |
| Cec05g0091 | Cec-Chr5:863598 | Cec06g1942 | Cec-Chr6:32760195 | 4.70E-90 | transposed | |
| Cec07g1312 | Cec-Chr7:28651797 | Cec06g1942 | Cec-Chr6:32760195 | 3.50E-15 | transposed | |
| Cec11g0037 | Cec-Chr11:521436 | Cec06g1942 | Cec-Chr6:32760195 | 4.30E-49 | transposed | |
| Cec03g0008 | Cec-Chr3:116409 | Cec06g1942 | Cec-Chr6:32760195 | 2.40E-59 | transposed | |
| Cec03g0308 | Cec-Chr3:3491305 | Cec06g1942 | Cec-Chr6:32760195 | 5.50E-119 | wgd | |
| Cec05g2829 | Cec-Chr5:38540501 | Cec06g1942 | Cec-Chr6:32760195 | 1.50E-61 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec06g1942 | - | - | - | 0.0 |