Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1951 ATGTCTAATATCGCTGCCAAGTCTTGCCTTCCTTGCCTGCAAACTCCGTTCACACCCCACCGGAAAATGGCTTCACCTTCCTCTAAACTCCTTCCACTCTTGGCTTTTCTCTCCGTTCTTCTCCGCGTCCATGCCCGATTGAACCTTGATCCTTCAGATCTCAGAGCCTTTTCTATCATAAAAAATGACTTGGGCATTGACAGTCAACTCTCCCCCTCCCCATGCCACAACGCCGGTGTGTTCTGCGAGCGGCGGCTCTCCGACAACCGCACTTATGTTTTGAGGATCACCAGGCTCATTTTCAACTCCAAAGGTCTCACTGGTTCTCTTTCTCCGGCTATCGGGCGGCTCACGGAGTTGCAAGAGCTTACGGTTTCTAACAATCACCTCGTTGACCAAGTACCTCCCCAAATCGTTGACTGCCGAAAACTGGAAATTCTCGATCTCCAAAACAACCAATTTTCTGGAAAAGTTCCGTCTGGATTGTCCTCACTGATTCGCCTTCGAGTCATCGATCTTTCGTCCAATAAATTCTCGGGGAGTTTGGGTTTCTTGAAGCATTTCCCCAACTTGGAAAGTCTCTCCATAGCCAACAATTACTTCACAGGGAAGATCCCAGCTTCAATTCGTTCATTTCGCAATCTTCGAGTCTTCAACTTCTCCGGAAATCGCCTTCTCGAAAGTTCAGCCCCTATCGTGAAGGGTGTTGAGTTCTATTCGGCTACAGAAGTTCCCAAGCGTTATAAGTTAGCTGAGAATTCCAGTACGAAAGGCACGCACAGGGCCGCCGCTACAGCGCCAACTTCGAGTGCTCAAGCTCCATCTCCCGTGCCACCCCCTACTCATAAGCATCGGAAAAATGAAGCAAAGAAGGTAATTTCTTGGATACTTGGGTTCCTCGCTGGAGCAATTGCTGGGAGTTTGTCAGGGTTTATCTTTTCTCTATTGTTTAAACTCGTCATAGCAGCTATAAAAGGTGGAAGCAAAAATTCAGGTCCCTCAATCTTTGCTCCTAAGTTGATAAAACGAGATGATTTGGCTTTTCTAGAGAAAGACGATGCGCTTGCATCGCTGGAGCTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAAGCTGAATTACCAGAAAAAAGTGGGAAAATGTTTGCAATAAAGAAGATAAGTCAACCCCCAAAGGATGCGGCCGAGTTAGCTGACGAGGATAGCAAGCTTATGAGCAAGAAAATGCGTCAGATCAAGTCAGAGATCAAAACTGTGGGCGAAATCCGGCATCGGAATCTTCTTCCTCTTGTGGCCCATGTCCCTCGTCCTGATTGCCACTACCTTGTGTATGAATTGATGAAGAATGGCAGCTTGCAAGATATGTTGAATCAGGTTTCAGCAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAAAATTGCTCTTGGAGTTGCATCTGGGCTTGAGTATCTTCACATGAATCATACCCCACGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTTCATGACGACATGGAAGCTCGAATTGCTGATTTCGGGCTGGCAAAAGCAATGCCAGATGCCCAAACTCACATAACAGCTTCAAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACAATGAAGTTCACTGATAAATGTGATATATACGGCTTTGGGGTTCTGCTAGGTGTCTTGGTGATCGGGAAACTCCCATCTGATCAGTTTTTCCAAAACACGGATGAGATGAGTTTGGTTAAGTGGATGAAGAATGTTATGACTTCGGATAATCCTAGGGGAGCCATCGATCCAAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTTTTGGCCCTCAAAATTGCCTGCTTTTGCACTATGGATAATCCAAAAGAGAGGCCTAATAGCAAGGATGTCAGATGCATGCTGTCCCAAATCAAGCACGATGTACCTGAAACTCCCTCTCAAAATGTCTAA 1980 46.16 MSNIAAKSCLPCLQTPFTPHRKMASPSSKLLPLLAFLSVLLRVHARLNLDPSDLRAFSIIKNDLGIDSQLSPSPCHNAGVFCERRLSDNRTYVLRITRLIFNSKGLTGSLSPAIGRLTELQELTVSNNHLVDQVPPQIVDCRKLEILDLQNNQFSGKVPSGLSSLIRLRVIDLSSNKFSGSLGFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPIVKGVEFYSATEVPKRYKLAENSSTKGTHRAAATAPTSSAQAPSPVPPPTHKHRKNEAKKVISWILGFLAGAIAGSLSGFIFSLLFKLVIAAIKGGSKNSGPSIFAPKLIKRDDLAFLEKDDALASLELIGKGGCGEVYKAELPEKSGKMFAIKKISQPPKDAAELADEDSKLMSKKMRQIKSEIKTVGEIRHRNLLPLVAHVPRPDCHYLVYELMKNGSLQDMLNQVSAGVKELDWLTRHKIALGVASGLEYLHMNHTPRIIHRDLKPANVLLHDDMEARIADFGLAKAMPDAQTHITASNVAGTVGYIAPEYHQTMKFTDKCDIYGFGVLLGVLVIGKLPSDQFFQNTDEMSLVKWMKNVMTSDNPRGAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLSQIKHDVPETPSQNV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32809476 32811455 + CePI673135_06g019510.1 Cec06g1951 206688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1951 659 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515(InterPro)
Cec06g1951 659 Gene3D Ribonuclease Inhibitor 39 183 IPR032675 -
Cec06g1951 659 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
Cec06g1951 659 SUPERFAMILY L domain-like 68 228 - -
Cec06g1951 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1951 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 276 649 IPR051564 GO:0016020(PANTHER)
Cec06g1951 659 SUPERFAMILY Protein kinase-like (PK-like) 355 648 IPR011009 -
Cec06g1951 659 MobiDBLite consensus disorder prediction 255 271 - -
Cec06g1951 659 ProSiteProfiles Protein kinase domain profile. 355 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1951 659 MobiDBLite consensus disorder prediction 252 286 - -
Cec06g1951 659 FunFam Leucine-rich repeat receptor-like protein kinase 447 654 - -
Cec06g1951 659 FunFam Leucine-rich repeat receptor protein kinase EMS1 90 185 - -
Cec06g1951 659 Gene3D Ribonuclease Inhibitor 184 235 IPR032675 -
Cec06g1951 659 Gene3D Transferase(Phosphotransferase) domain 1 447 657 - -
Cec06g1951 659 SMART serkin_6 355 648 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1951 659 Gene3D Phosphorylase Kinase; domain 1 348 446 - -
Cec06g1951 659 Pfam Protein kinase domain 358 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1951 Cec-Chr6:32809476 Cec04g1274 Cec-Chr4:32346014 7.50E-53 dispersed
Cec06g1951 Cec-Chr6:32809476 Cec07g0172 Cec-Chr7:1791846 2.00E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72112 PF00069 Pkinase 3.00E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1951 - - - 0.0