Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1962 ATGGGGAAGAAGACGAAGAAACCCGGAAAGGGAAAAGAGAAGACTGAGAAGAAAACGGCCAAAGCCGAGGAAAAGAGAGCTCGCAGGGAGAGCAAGAAGCTCTCTCCTGAGGATGATATTGATGCAATTCTCTTGAGTATACAAAAGGAGGAAGCGAAGAAAAAGGAAGTTCATGTTGAGGAGAATGTCCCTGCGCCATCTCCTCGGTCCAATTGTTCGTTGACTATCAATCCCTTGAAAGAAACAGAGTTGATCCTTTATGGGGGTGAATTTTACAACGGTACCAAGACATATGTCTATGGTGATCTGTATCGATACGATGTTGAGAAACTAGAGTGGAAAGTAATTTCAAGTCCCAATAGCCCCCCTCCTCGTAGTGCTCATCAAGCTGTTGCTTGGAAGAATTACCTCTATATTTTTGGTGGAGAGTTTACATCTCCTAACCAAGAGAGGTTTCATCACTACAAGGATTTCTGGGTGCTGGACCTGAAAACAAATCAATGGGAACAAATAAATTTGAAAGGTTGTCCTAGTCCACGCTCTGGTCATCGGATGGTCTTGTACAAGCACAAAATTATTGTTTTTGGTGGGTTCTATGACACTTTAAGGGAAGTGAGATACTATAACGACATGTACGTATTTGATCTGGATCAGTACAAGTGGCAAGAAGTAAAGCCTAGTCCTGGTGCAATGTGGCCTAGTCCTCGAAGTGGTTTCCAATTTTTTGTTCAGCAAGATGAGGTTTTCTTGTATGGTGGCTATTTTAAAGAAATTCAATCTGATAAGAACACTTCTGAAAGAGGAGTTGTGCATGCAGACATGTGGTCCCTTGATCCGAGGACTTGGCAATGGAATAAGGTAAAGAAAGGTGGGATGCCGCCTGGGCCTCGTGCAGGGTTCTCCATGTGTGTTCATAAGAGGCGAGCCTTGCTATTTGGGGGAGTGGTGGACATGGAAGTTGAAGGTGGCGATGCAATGATGAGTCTATTCTTGAATGAACTCTATGCATTTCAAATAGATAACCATAGATGGTATCCTCTAGAGTTAAGGAAGGAGAAGTCGACAAAGGCAAAGATTAAAAAAATTTCTGAGCAAAAGAACAATGAGGTTGCGTTTGATGATAATATAAATGAGGAGGTTGTTGACGTTGGTAAAATTGAAAATCCAGTCATGGACGAAGCATGCAACATGGAAACTGACATTGATGAAATATCTCATCATATATCTTCATCTGTATCCATTAACAACGGTGGATTGGAAATGAGTTCTGGCAACAAACAACAAGAATCTGGTTCGAACAAAAATGCTGTTTTGCCAGAGGTGATTAAGCCCTGTGGACGTATTAACTCCTGCATGGTTGTTGGAAGAGATACACTGTACATCTATGGGGGTATGATGGAGATTAAAGATCGAGAAATCACCCTTGATGACTTGCATGCTCTCAATCTCAGTAAACTTGATGAATGGAAGTGCATTATACCGGCCACGGAATCTGAATGGGTAGAAGCCTCGGAGGATGAAGATGAGGAAGATGATGAAGATGACAGTGAGAATGATGACAATTCTGAAGGAAGCAATGGAAGTGATGAGGATGACAGTGATGATGAGGATTTTGAGGCTGGAAATGATGGATCACGAAAAGTAGGAGATGCTGTAGCTTTAATTAAGGGTGAGGGCAGGAATCGCCGTAGGAAAGAGAAGCGGGCGAGGATCGAACAAATCAGAGCTAACCTTGGGCTTTCAGATTCACAAAGAACTCCCATGCCTGGAGAATCTCTAAGGGAGTTCTATAAACGTACAAATCTATATTGGCAAATGGCGGCACATGAGCATACACAACATACTGGAAAGGAACTTCGCAAGGACGGATTTGATCTTGCTGAATCTCGTTACAGGGAGCTTAAACCTATCCTTGATGAGCTTGCCATATTGGAGGCAGAGCAGAAAGCAGAAGAAGCAGAAGCTCCTGAAACTAGTTCAAGAAAAAGAGGCAAGAAGAAAAATAAAATTCGAATCTCCAAAACCCCAATCGGGTCACAGCGGCTCGTAGCCGGGTTCCGCAACTCGCAAATTACCAGAGCAATGAAGAAGAAAGCAACAGCAGGAACCATAATTCTTCTTTCACTTTTACTTTCTCTACAAGATGTTGTTCATCCTGCTTTCGCTCTATCTCCTTTAGACAGCAATCAGGACGTGGAGCAATCTGCAACTTCAAGACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACGGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTAGCTACGGGAAGTGCTTGGCTGATTTATGTGGGGCATTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAATCCTGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAATGAGGGACCATCAGCAAACCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGAAAACAAAAGCCATTTTCTAGAGGAGCCGCGAGGCAACCCGGCATCTTCTACATGGCATCTTCAATACTGATTTTGATGCTGTTGCCAATTTTCTATGTGATTGTCTACTTACACCGCAGAGAATCGAGAAATGGAATCGAAGTGCTTAGACGAATCTCGAAAGCTAGACCAGTAAGGATTTACATTGAAAGGCAAGACACGAATGGGGCCTTAAAAGTATGGAAATCTCTTTACCTTTTTCGAATTAGCCTTTCCCTCCATCAAGACTATGCTAGGTCAGTCTTGTTTTTAGGATTGCATGGCTTTTCATCCACGGTTGTCTCATCGAGCTTGCTGGTATCGTCATACTTTGCCGCAACTCCCATGAAGAGCAATCCCTTCTATGCCATAAGTAACAGAAATATGAATTGGAACACAAGATTTGGTATCAGGAATGACCAACCAAAGCAGATTGGAAATTAA 3198 42.25 MGKKTKKPGKGKEKTEKKTAKAEEKRARRESKKLSPEDDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCSLTINPLKETELILYGGEFYNGTKTYVYGDLYRYDVEKLEWKVISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWVLDLKTNQWEQINLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDMYVFDLDQYKWQEVKPSPGAMWPSPRSGFQFFVQQDEVFLYGGYFKEIQSDKNTSERGVVHADMWSLDPRTWQWNKVKKGGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGGDAMMSLFLNELYAFQIDNHRWYPLELRKEKSTKAKIKKISEQKNNEVAFDDNINEEVVDVGKIENPVMDEACNMETDIDEISHHISSSVSINNGGLEMSSGNKQQESGSNKNAVLPEVIKPCGRINSCMVVGRDTLYIYGGMMEIKDREITLDDLHALNLSKLDEWKCIIPATESEWVEASEDEDEEDDEDDSENDDNSEGSNGSDEDDSDDEDFEAGNDGSRKVGDAVALIKGEGRNRRRKEKRARIEQIRANLGLSDSQRTPMPGESLREFYKRTNLYWQMAAHEHTQHTGKELRKDGFDLAESRYRELKPILDELAILEAEQKAEEAEAPETSSRKRGKKKNKIRISKTPIGSQRLVAGFRNSQITRAMKKKATAGTIILLSLLLSLQDVVHPAFALSPLDSNQDVEQSATSRPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQERHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVSYGKCLADLCGALHCDLKMDIKSRKSKCNPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHSCTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKARPVRIYIERQDTNGALKVWKSLYLFRISLSLHQDYARSVLFLGLHGFSSTVVSSSLLVSSYFAATPMKSNPFYAISNRNMNWNTRFGIRNDQPKQIGN 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32865237 32882144 - CePI673135_06g019620.1 Cec06g1962 206699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1962 1065 Pfam Galactose oxidase, central domain 246 305 - -
Cec06g1962 1065 Pfam Galactose oxidase, central domain 190 239 - -
Cec06g1962 1065 Pfam Galactose oxidase, central domain 134 188 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 728 752 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 497 569 - -
Cec06g1962 1065 Pfam Galactose oxidase, central domain 68 122 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 738 752 - -
Cec06g1962 1065 Gene3D - 46 375 IPR015915 GO:0005515(InterPro)
Cec06g1962 1065 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 663 IPR052588 -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 649 674 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 500 539 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 12 37 - -
Cec06g1962 1065 MobiDBLite consensus disorder prediction 1 37 - -
Cec06g1962 1065 Coils Coil 12 32 - -
Cec06g1962 1065 Pfam Domain of unknown function (DUF4110) 579 663 IPR025183 -
Cec06g1962 1065 ProSitePatterns Zinc finger C2H2 type domain signature. 810 831 IPR013087 -
Cec06g1962 1065 SUPERFAMILY Kelch motif 82 491 IPR015915 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1476 Cec-Chr5:18181692 Cec06g1962 Cec-Chr6:32865237 2.30E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1962 - - - 0.0