Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1965 ATGGCGAGAGTTAACGATAATTGGGAGAGGCTAGTGCGTGCGACTTTGAAGAGAGAGCAGCTCAGAAATGCAGGGCAAGGCCATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCACCCTCTCTTGGAAAAACCACAAACATTGACGCTATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCTCTGTTGCTAGGATTTTGTGTGAGCAGGCGTACAGAATGGCACAAAACTTGGATCCCAACAGCGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGGGCATCTATAGATCGTCATCGTGATATTGAACATCTGTGGGAGTTCTACAAGCAATATAAGAGACGCCATAGAATAGATGATATACAGAAAGAAGAACAGAAATGGCGGGAGTCAGGAGTAATGAGTGCTAACTTGGGAGAGTTGGAGCTTAGATATTCTGAAGCAAAGAAAGTAATTGCTAACCTAAGGGCTTTAGTTGAGGTGATGGAGGCCCTCAGCGGAGATGCAGATCCTCAAGGAGTTGGAAGATTGATTATGGAGGAGCTACGAAGAGTTAGAAGTTCTGATACTACATTATCGGGGGAATTTGTACCCTACAATATTGTCCCCTTGGATGCACAATCACTAACAAACGCCATTGGCATTTTCCCTGAAGTTAAGGCTACAATATCTGCAATCAGATATACAGAGCATTTCCCTAGACTGCCTTCGGAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATGTATTTGGATTCCAGGGGGACAACATAAGAAATCAACGAGAGCATGTGGTTCTCATGGTAGCAAATGCTCAATCTCGTCTTGGCATACCTAATAATGCTGATCCGAAAATAGATGAGAAAGCAGTCAATGAGGTTTTTTTGAAGGTGCTTGATAACTACATCAAGTGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTTCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCACCATATGGCAAAAGAATTGGATGCTATACTTGATCATGGAGAAGCAATTCCTTCTAAAAACTGTATGCTGGAAGATGGTTCTATGTCTTTCCTCCAACGAATCATTTGTCCTATCTACGAGACACTTGTAGCCGAAACTGAAAGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTACGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTTGAATTGGGCTGGCCAATGAGGAAGGAATCAAATTTTTTACAGAAGCCTAGAGGCTCGAAACGGACTGGCAAGACTTCTTTTGTTGAGCATCGCACATTTCTTCATTTGTATCGCAGTTTCCACCGTCTCTGGATCTTTTTGGCAATTGTTTTCCAGGCTCTGACAATTTTTGCCTTCCACAATGAGCGTATTAATTTGGACACTATCAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTTATAGAGAGCTCCTTAGATGTATTGCTTACTTTTGGGGCATACACGACTGCAAGAGGAATGGCTATATCAAGGATTGTTATTAGGTTCTTCTGGTGGGGATTAAGTTCAGGTTTTGTGACTTATGTTTATGTGAAGGTTCTTGAAGAAAGAAATACTCGAAGCTCAGATAATTCATTCTATTTTCGAATATATATTATAGTATTGGGTGTTTATGCTGCTTTACGCCTTGTGGTTGCAATGTTGCTGAAGTTACCTGCATGCCATACTCTTTCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTTCGTCGGTCGTGGCCTATATGAAAAACCAAGTGACTATTGCAGATATGTAGCCTTTTGGTTAGTGCTCTTGATTTGTAAATTTGTTTTTGCTTACTTTCTCCAGATTAAACCACTTGTCCAACCAACCACTACTATTGTCAACCTTCCATCTCTTGAATATTCGTGGCATTCTTTCATTTCGAAGAATAACAATAATGTGTCGACTGTAGTTAGTTTATGGGCTCCTGTTGTGGCTCTCTATCTGTTGGACATTTACATATGGTACACACTCTTGTCTGCCATCATTGGTGGTGTAAAGGGTGCTCGGGGTCGTTTGGGAGAGATACGATCACTTGAAATGATGCACAAACGTTTTGAGAGCTTTCCAGAAGCATTTGTGAAGAACCTTGTCTCTACACAGACAAAAAGTTTGCCACCCACCGGACAAGCACCTCAGGACTCTCCGGATATGAGCAAGACATATGCAGCAATCTTTTCCCCATTTTGGAATGAGATCATTAAAAGTTTACGTGAGGAAGACTTTATTAGCAATAGGGAGATGGACTTGCTTTCTATTCCTAGCAACACAGGGAGCCTCAGATTGGTCCAATGGCCTTTGTTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATCTGGCTTTGGATTGCCAAGATACGCAGACAGATCTATGGTACAGAATATGTCGGGATGAATATATGGCATATGCAGTTCAAGAATGCTACTATAGTGTTGAAAAAATCTTATATGCCCTTGTAGATGGTGAAGGGAGACTTTGGGTTGAAAGGATATTTCGGGAGATTACCAATAGTATTTCAGAGGGCTCGCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTGTTACAAAAGTTTACGGCGCTTACAGGGCTTTTGACTCGAAATGAAACTCCTGAACTTGCTAGAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGAGGTTGTTACCCATGACCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAACGAAGGTCGCCTTTTTTCTCGGATTCAATGGCCCAAAGATTTGGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACCGTGAAGGACTCTGCAGCTAACATCCCAAAAAATCTTGAAGCAAGAAGAAGACTACAGTTTTTTACAAATTCATTATTTATGGACATGCCTTCGGCAAAACCTGTCAGTGAAATGGTGCCGTTCAGCGTCTTTACTCCATACTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGAATGGAAAACGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTTTGGAACGGATTGGTCGAGGTCATGCCACTGGGGAAGCAGAGCTCCAAAAAAGTCCAAGTGATGCATTGGAGCTTCGATTTTGGGTTTCTTATAGAGGGCAGACTCTAGCTCGGACAGTTCGTGGTATGATGTACTACAGAAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACGAACTTTCCCACAAGTCAGGGCTTTGAGTTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTTACTTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGTTCCAGAGGCTGCTGATATTGCTCTTTTGCTGCAGAGGAATGAGGGACTTCGTGTTGCTTTCATTCACGTGGAAGATAGTGTTGCATCTGACGGTAAGGTTGTAAAGGAATTTTATTCGAAGCTTGTGAAAGCTGATATACATGGAAAAGATCAGGAGGTATATTCGATCAAACTTCCTGGAGAACCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAACCATGCTATAGTTTTCACTCGTGGAGATGCTGTTCAAACTATTGACATGAACCAGGACAACTATCTTGAAGAGGCATTGAAAGTGAGAAATCTTCTGGAGGAATTTCATGGAAAGCATGGGCTTCGCCCTCCTACCATCTTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCGTTAGCGTGGTTCATGTCCAATCAGGAAACTAGCTTTGTAACCTTAGGACAACGTGTCTTGGCAAGTCCTCTCAAGGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTCTGAGGCAGGGTAACATTACACACCACGAGTACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAAATAGCCCTGTTTGAAGGGAAAGTAGCTGGTGGGAATGGAGAGCAAGTTCTTAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTTTCGTTTTATTTCACAACTGTTGGTTACTATGCATGTACAATGATGACAGTTCTTGTGGTTTACATTTTCTTGTATGGACGGGTTTACTTGGCCTTCGCTGGACTTGACGAAGCAATCTCAAGAAGAGCAAAAATGTTGGGAAACACGGCATTGGATACTGCACTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTTACAGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGCTGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTATGTTCCGTCTTCTTCACATTCTCGTTGGGGACTAGAACTCATTATTTTGGACGAACCATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGCAGAGGCTTTGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCGTATGGGTATTCAGAAGGAGGTGCAAGTTCTTTTGTTTTACTTACTCTCAGCAGTTGGTTCCTCGTCATTTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACAAGCTGGCTATTCTACAAAGGTGGAGTAGGGGTTAAGGGAGAGAACAGCTGGGAATCATGGTGGGATGAGGAACAGGCACATATTCAAACATTCCGGGGTCGAATATTGGAGACAATCTTGACTGTGAGGTTCTTCCTATTTCAATTTGGAATTGTGTACAAGCTCCATCTCACAGGAAAGGACACATCACTTGCGTTATATGGTTTCTCGTGGGTGGTGCTCGTTGGGATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATTGTACTGGTTACAGCTCTTGGTCTAATTGTTGGCTTTACTAACCTATCAATAACCGATTTATTTGCAAGTCTTCTGGCATTTATTCCTACTGGATGGGCTATATTATGTTTAGCAGTTACTTGGAAGAAAGTGGTGAGAAGTCTAGGCTTGTGGGACTCGGTACGTGAATTTGCCAGGATGTATGATGCTGGGATGGGATTAATAATATTCGTGCCCATTGCATTCTTATCCTGGTTTCCATTCATTTCCACGTTCCAGTCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGTGGGCTTGAGATCTCCCTCATCCTTGCTGGAAACAAAGCAAACGTCGAGACATACTGA 5721 41.85 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSSVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASIDRHRDIEHLWEFYKQYKRRHRIDDIQKEEQKWRESGVMSANLGELELRYSEAKKVIANLRALVEVMEALSGDADPQGVGRLIMEELRRVRSSDTTLSGEFVPYNIVPLDAQSLTNAIGIFPEVKATISAIRYTEHFPRLPSEFQISGQRSADMFDLLEYVFGFQGDNIRNQREHVVLMVANAQSRLGIPNNADPKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAILDHGEAIPSKNCMLEDGSMSFLQRIICPIYETLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMRKESNFLQKPRGSKRTGKTSFVEHRTFLHLYRSFHRLWIFLAIVFQALTIFAFHNERINLDTIKAILSIGPTFAIMNFIESSLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSGFVTYVYVKVLEERNTRSSDNSFYFRIYIIVLGVYAALRLVVAMLLKLPACHTLSEMSDQSFFQFFKWIYQERYFVGRGLYEKPSDYCRYVAFWLVLLICKFVFAYFLQIKPLVQPTTTIVNLPSLEYSWHSFISKNNNNVSTVVSLWAPVVALYLLDIYIWYTLLSAIIGGVKGARGRLGEIRSLEMMHKRFESFPEAFVKNLVSTQTKSLPPTGQAPQDSPDMSKTYAAIFSPFWNEIIKSLREEDFISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCQDTQTDLWYRICRDEYMAYAVQECYYSVEKILYALVDGEGRLWVERIFREITNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRNETPELARGAAKAVFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIQWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRGHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKVPEAADIALLLQRNEGLRVAFIHVEDSVASDGKVVKEFYSKLVKADIHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEALKVRNLLEEFHGKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTFRGRILETILTVRFFLFQFGIVYKLHLTGKDTSLALYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSITDLFASLLAFIPTGWAILCLAVTWKKVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32898396 32933521 + CePI673135_06g019650.1 Cec06g1965 206702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1965 1906 Pfam 1,3-beta-glucan synthase component 1030 1725 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cec06g1965 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
Cec06g1965 1906 SMART FKS1_dom1_2 347 460 IPR026899 -
Cec06g1965 1906 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 39 1900 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cec06g1965 1906 Coils Coil 155 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1443 Cec-Chr3:32137507 Cec06g1965 Cec-Chr6:32898396 0.00E+00 dispersed
Cec03g1445 Cec-Chr3:32249727 Cec06g1965 Cec-Chr6:32898396 4.50E-50 dispersed
Cec03g1446 Cec-Chr3:32262407 Cec06g1965 Cec-Chr6:32898396 1.20E-118 dispersed
Cec03g1449 Cec-Chr3:32342776 Cec06g1965 Cec-Chr6:32898396 1.10E-97 dispersed
Cec03g1450 Cec-Chr3:32363531 Cec06g1965 Cec-Chr6:32898396 1.00E-34 dispersed
Cec03g1452 Cec-Chr3:32389192 Cec06g1965 Cec-Chr6:32898396 2.50E-158 dispersed
Cec03g1454 Cec-Chr3:32420743 Cec06g1965 Cec-Chr6:32898396 0.00E+00 dispersed
Cec06g1965 Cec-Chr6:32898396 Cec09g2353 Cec-Chr9:40336213 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1965 K11000 - csv:101217890 3701.37