Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g2021 ATGGGTGTGTCAAAAGATGGGCAACGACAATCTCTGGTGCCAAGCTTTGTGTATTCTGGCAACAGAGGATGTTTCCAAACCCAAACACTGGTTAGTCGCTTCCCAATTGAAGCTCCGAAAGAGAATATAAAGATGTATTCACCGGCCTTCTACGCGGCTTGCACAGCAGGCGGCATTTTGAGTTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAACATGCAGATCGACCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAAAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATGGTTGGAACAGAGAATGCAGTCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTGATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAGACTCAACCTGGCTTTGCTCGGGGTTTGTCAGATGGCCTTCCAAAGTTTGTCAAGTCTGAGGGTGCTCTCGGACTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTTTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGAGGGTATGTGGCCGGCGTCCTCTGTGCTGTGGTCTCACACCCAGCCGACAATCTTGTCTCTTTTCTCAACAATGCCAAGGGTGCAACTGCTGGGGATGCTGTCAAGCAGCTGGGCGTATGGGGTCTCTTCACTCGTGGCCTTCCACTTCGGATTGTTATGATTGGAACTCTTACTGGGTCGCAATGGGGTATATACGACGCGTTCAAAGTTTTCGTTGGACTGCCAACAACTGGTGGCGCTACCCCTGCTCCTGCCGCTAGCAAGTGA 1032 49.81 MGVSKDGQRQSLVPSFVYSGNRGCFQTQTLVSRFPIEAPKENIKMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGTENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVKQLGVWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGATPAPAASK 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33336302 33337744 - CePI673135_06g020210.1 Cec06g2021 206758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g2021 343 Pfam Mitochondrial carrier protein 147 234 IPR018108 -
Cec06g2021 343 Pfam Mitochondrial carrier protein 51 136 IPR018108 -
Cec06g2021 343 FunFam Phosphate carrier protein, mitochondrial 49 327 - -
Cec06g2021 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 230 IPR018108 -
Cec06g2021 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 133 IPR018108 -
Cec06g2021 343 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 36 335 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cec06g2021 343 SUPERFAMILY Mitochondrial carrier 52 322 IPR023395 -
Cec06g2021 343 Gene3D Mitochondrial carrier domain 49 327 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1439 Cec-Chr5:16964836 Cec06g2021 Cec-Chr6:33336302 1.30E-150 dispersed
Cec06g2021 Cec-Chr6:33336302 Cec09g1205 Cec-Chr9:12576867 9.80E-12 dispersed
Cec06g2021 Cec-Chr6:33336302 Cec09g1204 Cec-Chr9:12569511 2.80E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g2021 K15102 - csv:101220423 612.068