Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g2035 | ATGGGTCCAAGTGTCAAGTGTGTGAAGCTGGTGAAGTTTGATCTGAATGAGACTTTGGACTTCTGGAGAGAAGGCGTAATAAACCAAAGCAAGGTGCAGAGGGTGGTGAAAATTAAAAAAGTGGATTCGAAGCGAGGGAAGAGGCCCCTTTGTTCCGATGAGTCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAACATGACATGTCAGCCATGGTTTGTGCGTTAGGTGAAGTGATAAGGAGTGGGAGTAGCAAAAGCCCAGCGGTAGTTGAAGCAGATTATTGGCCAGAATCGGAATCGCAATCGCAGCGAGCAGATCATGAAGAAGAAGTGAAAAGAGAGAGTCGGCATTATCGAGGAGTAAGACAGAGACCGTGGGGAAAATGGGCAGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGCTAGGCACCTTCGACACTGCCGAGGCTGCAGCACTTGCTTACGATGAAGCTGCCCTTAGATTCAAAGGCACAAAAGCCAAGCTCAACTTCCCTGAGAGGCTCACCACTCCACCCTCCTATGCCTATCATCATTCCACCTTTATGCTCAATCTCCACTCCTCAACTTCTCATCCTTCCCATCATCAGGACCACAAAAATTAA | 642 | 48.13 | MGPSVKCVKLVKFDLNETLDFWREGVINQSKVQRVVKIKKVDSKRGKRPLCSDESEEENPFPIYSARSEHDMSAMVCALGEVIRSGSSKSPAVVEADYWPESESQSQRADHEEEVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYAYHHSTFMLNLHSSTSHPSHHQDHKN | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 33433079 | 33435893 | + | CePI673135_06g020350.1 | Cec06g2035 | 206772 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g2035 | 213 | SMART | rav1_2 | 121 | 184 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | PRINTS | Ethylene responsive element binding protein signature | 122 | 133 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | PRINTS | Ethylene responsive element binding protein signature | 144 | 160 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | Pfam | AP2 domain | 121 | 170 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | CDD | AP2 | 121 | 179 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | FunFam | Ethylene-responsive transcription factor 2 | 120 | 179 | - | - | |
Cec06g2035 | 213 | ProSiteProfiles | AP2/ERF domain profile. | 121 | 178 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | Gene3D | AP2/ERF domain | 120 | 180 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec06g2035 | 213 | PANTHER | DNA-BINDING DOMAIN | 82 | 196 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Cec06g2035 | 213 | MobiDBLite | consensus disorder prediction | 98 | 117 | - | - | |
Cec06g2035 | 213 | SUPERFAMILY | DNA-binding domain | 121 | 179 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0626 | Cec-Chr2:6256031 | Cec06g2035 | Cec-Chr6:33433079 | 2.80E-26 | dispersed | |
Cec05g1176 | Cec-Chr5:10717636 | Cec06g2035 | Cec-Chr6:33433079 | 1.50E-23 | dispersed | |
Cec06g2035 | Cec-Chr6:33433079 | Cec08g0740 | Cec-Chr8:19134982 | 5.10E-27 | dispersed | |
Cec06g2035 | Cec-Chr6:33433079 | Cec06g0172 | Cec-Chr6:1728157 | 2.90E-30 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29854 | PF00847 | AP2 | 4.60E-15 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g2035 | - | - | - | 0.0 |