Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0079 ATGGCTTTCCAGAATATCGAAGTAACCCATTTCTATACGGTTCTTCTATGGTTTATGGTCTACGCAATAACGCACTGCTTTGCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCGGCGGTATTTCAATCCCCGAAATGCCCTCTTTGGAAGCTCTCCGACTACACATTTCAACCTCCCAACGCCCCTCATTGTCAAATTGCAATGCATCAGGGTCGTAGGAAGTATCAGGAGGATCGCACTCTTTGTGCTCTCGACGTTCGAATTCCCTTCCCAAGTAAAACAGGTCTTAAGGAGGTTCCTGTGGGAATTATAGCAGTTTTTGATGGTCATAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTACTCTGGAATTTTCAAGAGATCCATTAAGGCATCTTCAAATGAGAGGGATCATTGTACCCTCTTTAATCAACTTAGTTGGAGCGACAAAATTAGTAACCGTGACCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGCAGATTTTGACGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGCTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAGGCACATAAAAATAATCTTGTTTCCGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCGAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCGCTTCACGTGCAAGGGGCTATGGAAATTCTAGACCAGATTCATATGATGGGCTGATGCATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGATTGGGGTGGTGTACCGAGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGACGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAGGTGACTGATTGGCAACCTTTGTCTCCCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCCCACAAGATGTTTGTGACTTGTTGTGGGAAATAAACAATGATGGTATGTCAAGTTCCGAACATTCTCCTTCATGCTCATACTCACTGGCGGATTGCATTGTTAGCACTGCCTTTGAACGGGGAAGTATGGATAACATGGCTACTATTGTGGTTCCTTTAAGACCTACTAGTTCTTCTCGGAGATTTCAGGAGGGGAGCTTTGTTGCACAGAGAGACTCAAGTTTTCCCATATCTGGAATAGAAAATCTTATTAAAGAGCACTCAGGCAAGGATGTCTCTTCCAGTGCTGTGCAGTTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAACAGATTATTAGTTGAAGGAAAGCACAATAATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTACATGTTGCGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAATCCCTTAATCAGCCATATGGTGGATCTGTCAATGTGTACACCGACCAAAGCTTGTGCTTTCATCTTGGAATGATTGGAGCCAATGGCCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTTCATGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATTTGTTGAAGAAAAGGTTTGGTCGTGGTTCCTATGGCGAAGTATGGCTGGCTTTTCACGGGAATTGCCAGGAAGTGTTTAGTGCAGTAGGAGAGAATGCTAACCTTTCGTGCGACTCATCTTTTGGAGACACCAATGCCAGAAATTATAACTGCTCTTCAAATAGTTCTCAAGGCTATGCTCTGGATGATAACTTGTTCATCATGAAGCGTGTTATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACATGCCTTGGAGATGTGTTGTCGACGGGAACTTCAAACTTTGTCTTTGAAGAATCACCACGGGAACCTAAAGATTTATTGACAAATGATGAATCACTGGGTTATACAGTAGGGGAAACTAGGCATTTTAAAAATATTTCTCCGAATTGGTTTAGACCAAAGAGAGTTGTCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCCCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGGACGTCCCTCTCGAAGCTCATATATTCTATTGAAAATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCATGTTCAAATATTACGACCTTCTAAGTGGTGGCGTTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAATTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCAAAGGGGAGATGAGAACTTCTCTACGAAAATGCGGATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTTAAGCATCTTTATGGATCTATGGGACCTTCTAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCTAGTGCTACATTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAGCATCTTCAAGGCTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGATTTCCTCAAGAAGTTATCAAAAAAATGGTCATGGAGGTTCACCAGCATCCTGGAAATGCTCCGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTGCGATTGGTCCGCAATCTACTACAATGGAATCCGGAGGACCGTTTAAATATAAGTTATTCTTCCACCAAAGGTTTTGTTGCTGACAATCAGAAGCTCAGTTGA 3273 40.94 MAFQNIEVTHFYTVLLWFMVYAITHCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQPPNAPHCQIAMHQGRRKYQEDRTLCALDVRIPFPSKTGLKEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRSIKASSNERDHCTLFNQLSWSDKISNRDLELGRLKYLLPADFDDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSYDGLMHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSPNDSYLVASSDGIFEKLSPQDVCDLLWEINNDGMSSSEHSPSCSYSLADCIVSTAFERGSMDNMATIVVPLRPTSSSRRFQEGSFVAQRDSSFPISGIENLIKEHSGKDVSSSAVQLEHSHPVMSKFNRLLVEGKHNNLGCFYLSENLDEYKDYMLRTQNEEEEYLCDLPHALPESLNQPYGGSVNVYTDQSLCFHLGMIGANGQCFNPEGFASFIGLLESIPFHDPGPDYQLFEHSPPVLRYLLKKRFGRGSYGEVWLAFHGNCQEVFSAVGENANLSCDSSFGDTNARNYNCSSNSSQGYALDDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTCLGDVLSTGTSNFVFEESPREPKDLLTNDESLGYTVGETRHFKNISPNWFRPKRVVYEEGLNHIVRYVESFESRSNEIWLVFHYEGTSLSKLIYSIENADEEKVEQKNHVQILRPSKWWRWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSQRGDENFSTKMRIIDFGSAIDEFTVKHLYGSMGPSRAEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKQLAYKLRSFMELCILIPGISSRSYQKNGHGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPEDRLNISYSSTKGFVADNQKLS 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 789800 809695 - CePI673135_07g000790.1 Cec07g0079 206858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0079 1090 ProSiteProfiles PPM-type phosphatase domain profile. 68 440 IPR001932 -
Cec07g0079 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 861 873 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0079 1090 Pfam Protein phosphatase 2C 201 256 IPR001932 -
Cec07g0079 1090 Pfam Protein phosphatase 2C 303 433 IPR001932 -
Cec07g0079 1090 PANTHER PROTEIN PHOSPHATASE 69 439 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec07g0079 1090 ProSiteProfiles Protein kinase domain profile. 612 1083 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0079 1090 SMART serkin_6 612 1083 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0079 1090 SUPERFAMILY Protein kinase-like (PK-like) 770 1075 IPR011009 -
Cec07g0079 1090 Pfam Protein kinase domain 772 1074 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0079 1090 SUPERFAMILY PP2C-like 65 441 IPR036457 -
Cec07g0079 1090 CDD PP2Cc 75 440 IPR001932 -
Cec07g0079 1090 SMART PP2C_4 62 438 IPR001932 -
Cec07g0079 1090 Gene3D Transferase(Phosphotransferase) domain 1 816 1083 - -
Cec07g0079 1090 Gene3D - 61 448 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0079 Cec-Chr7:789800 Cec08g1028 Cec-Chr8:22189554 1.30E-17 dispersed
Cec07g0079 Cec-Chr7:789800 Cec11g1465 Cec-Chr11:28853053 8.20E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72113 PF00069 Pkinase 1.90E-23 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0079 - - - 0.0