Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0092 | ATGCTCGTCTTCTTCAGGGCTCCAGGAGCTGATTGGAAGATGAGTTTAATATCACAAAATGTTGCTGTAATTAGTAGTATTCAGAAGGTTACAGGGGAGAATATTGTTGGTTCGTCATCTCCATTGAGAAATGGAGATGCTAATGATGTAGAAAACTCTGGTCTAGATACTACTAGGGCAAAAAAGAGAAAGAAAGAACATAAAAAAGAAGATGAACAACAAAAGGAAATCAAGAAGCTTGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGCAAAATGGTTTTAATTCTGAGGAGAAAGGTCCTGCTTTGTACATAATGGACCGCTCTGCAAATAATTCCCTTTCTGCATATGAAGATGATTTTGGGCCCCTACATGAGAGTACGAATGAGGAACCTCAGCAAAGAAAAGCAGTATGGGTCGACGAGGAAGAGGAGAAGGCCACGGTTAATATTACTAATGTTAGTAGACTGAGAAAGTTGAGGAAAGAAGAAGATGAGAATTCGATTTCAGGCTCAGAGTATGTGTCAAGATTGAGGGCTCAACATGCCAAGCTAAACCCAGGCACCGAGTGGGCTCAACTTGATGCGCAATCCACGGGTGACAGTGATGATGATGATCGATCATCAGATGATGAAAATGCAGTTGCATTGGCTAATGGTTATGATAATGTTGATTCTATTGATGATATCCTTCGAACGAGTGAGAATCTCGTTGTGAAGAGAGGAGCAAAATTGTTACCTGGTCTTCTTGAATACACAAGACTTGTAGATGCTAACGCAGAGGAGCCATCTAATGGTCCTGCCAATTCGGTTCAGTTTCATTGCAATGCTCAGTTACTGTTAGCCACTGGGTTGGATCGAAGGCTTAGATTTTTTCAGATTGATGGCAAACGAAATACCAAAATTCAAAGCATTTTCCTTGAGGATTGCCCTATACGAAAGGCATCATTCTTGCCTGATGGATCTCAGGTTATCATAGCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATTTAGTGAAAGCAAAAGTAGATAAAATTGGCCCTCTTGTAGGTCGAGACGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTTGTTGGTAATGAAGGCTACATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATCGGAACGCTTAAGATGAATGGAAGCGTTCGTTCTTTGGCATTCGCAGACAATGGACAACAGCTATTGAGCTCCGGCGGTGACGGGCAGGTCTACCATTGGGATTTACGAACAAGAACGTGCATACACAAGGGTGTCGACGAAGGTTGCATCAATGGTACTGCATTATGTACATCTCCAAATGGAGCATTGTTTGCAGCTGGTTCTGACAGTGGGATTGTTAACATCTACAATAGACAAGAATTCTTAGGGGGAAAGAAGAAGCCATTGAAAGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTTAAATTCAATCATGATGCTCAAATTTTGGCCATCTGTTCAAGAATGAAGAAAAGTAGTTTGAAGTTGATACATGTTCCTTCTTTTACGGTATTTTCGAACTGGCCACCGCCGAAGAAGAACCTTCAATACCCTTCATGTTTGGATTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGTTTCTTCTTCCATTTGTTTTCTGTACGCATTGGTCGTACAAGAAGCGCAATAATAATGTTTGTGGGATCGAAATCTTAGCTTCAGAGATGGCTGGAGATGGATTTGTAATCCCTGTGGAATCTCAGGTGAGTTCGGTGAAGAAGAAGAAGAAGACGACGACGACGACGACAACGAAGAAAAAGAATACTGCGATTTCCACGAGCTGGGTTTCGTTGGACCATGAAGGAAGGAGTACGATTTTGGATGTGGATAAGTATGCGATTATGCAAAGAGTTCAGATTAATGCTAGAGATCTTCGGCTTCTCGATCCTCTCTTGTCGTATCCTTCCACTATCTTGGGCAGAGAAAGAGTGATTGTTCTTAATTTGGAGCACATCAAGTCAATTATCACTGCAGACGAGGTGCTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAACTGCAGAGACGGTTGCCTTCCACAAATTCCATATACCAAGGACAAGGGGAAGAAGAAGAGCCTTCTACCACGCAAAATGAGTCCGCTGAAAACGAATTTCCATTTGAATTCCGCGCTTTAGAGGTCGCACTCGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTAGAGACTGATACATATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGACCGAGTGCGCAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGACGACGACGACATGGCAGAACTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGTGGCTCTGGGACTCCAATTTGGTTTCTTGCGTCTCCTAAGGACTATTCAAAGATGTCTAAAACTAGTAGAGCAAGTGTGATTACTATTCGAGGAGAGAATGATGTGGAGGAACTAGAAATGCTACTCGAGGCTTATTTTATGCAAATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAGTACATCGATGACACGGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAACTTATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATATTTGGAATGAATATCCCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCGTATGCGCGATACAAAGAGTTGAGGTACGTGGTTGAAGTTTTTGATTCTTTTTGGGGTATGGCGAATCGGGTTGTTAAAGTGAAGAGGGAAGCCATTGCAGCATGCATAACTTGCCCACTTTGTAATAAGCTCTTGAAAGAAGCAACCACCATTTCTGAATGTCTTCATACTTTTTGCAGAAAGTGCATATCCGATAAGATTTCTGATGAGGAACTAGAAAACTGTCCAGTATGTAATATTGACCTCGGGTGTGTCCCACTGGAGAAATTAAGGCCAGACCACAATCTAGAAGATTTAAGGGCCAAGATTTTCCCTAGTAAAAGGAGAAAATTCAAGACGCCGGAAGTTGCTCCTGTTATTCTACCACCGGTTAGAAGAAAGGAAAGATCACTTTCCTCGTTGGTGGTCAATAGTCCAAGAGTGTCAAGTCATGCTACCGCAACTGGAAGAAGAACAGCAGCTGCTGCTGCAAGAATTGGTTCTATTTTACGAACACCAAGAGTCTCTTCTGAGAAGCGAGTGAAGAAAGAGGATGATTCCATGGACGACGGTTCAGAGAGCTCAAGTTCTCTTGAGACATCAGACAAATTCAATCAGAATAAAAGGCCGGATTCCAGTCCTACCAAGTTGACCATATCTTTGCGCAATAAAGAAGCCGAAAATGGTGTTAACTCAGTGGAAGGGAACTTGGATATCTGGAAACCTCTAAATTTCTTAGTTGAGGTTGCAAATAGGAGTAAATGTTCCAAATCTAATTCACAAGGATTCGAAACTAAAGTCGAGCCTAGAGAAGTCGATGGAAGTGAAGCTCAGGCCAGCAAATCTAGAAATAGGGAAGGCAAACGCAAGCAAAAACGTGAGAATGGAAAAACTAGAGCAGACCCAGTATCTCCAGAAACTGAAAAACCTAAGAAACTGCGTAGGGTCCGCCAGAAAAGGGAATCTTTTTATGGGGACTCCAGCCTTACACCTCAGGTTGTGTTGGATGCCTCTAGTGCTCGGCATGAAAGAAAAGCCGGTCCGATTTGGCTCTCACTCATAGCCTCTGATCAGGAAGGAGATGTATCGTTGCCCCAAATTCCTGCTAAGTATTTGAGAATAAAGGATAGAAACTTGCCAGTATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCTCCCAAGTGAATCAGAGGTTGAAGTCAAGTGTATGGGACATCCAGTAGTTCCCACTCTGGATTTGCATAGTTTAGTTGATTTGTGGCTACAAACAGCATCAACCTCGGAAAAGATCCCGGCATCGATCGGCTCATCGGCGGAGGATTTCATTATGGTTCTCTACTATGCTAGAAAGATCACAGTTTCTTGA | 4299 | 42.31 | MLVFFRAPGADWKMSLISQNVAVISSIQKVTGENIVGSSSPLRNGDANDVENSGLDTTRAKKRKKEHKKEDEQQKEIKKLENFLFGSLYSPVEFGKDEEQNGFNSEEKGPALYIMDRSANNSLSAYEDDFGPLHESTNEEPQQRKAVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSTGDSDDDDRSSDDENAVALANGYDNVDSIDDILRTSENLVVKRGAKLLPGLLEYTRLVDANAEEPSNGPANSVQFHCNAQLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGRDEKSLEVFEVSPDSSTVAFVGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADNGQQLLSSGGDGQVYHWDLRTRTCIHKGVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTVFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKFLLPFVFCTHWSYKKRNNNVCGIEILASEMAGDGFVIPVESQVSSVKKKKKTTTTTTTKKKNTAISTSWVSLDHEGRSTILDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSIYQGQGEEEEPSTTQNESAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKMSKTSRASVITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARYKELRYVVEVFDSFWGMANRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEELENCPVCNIDLGCVPLEKLRPDHNLEDLRAKIFPSKRRKFKTPEVAPVILPPVRRKERSLSSLVVNSPRVSSHATATGRRTAAAAARIGSILRTPRVSSEKRVKKEDDSMDDGSESSSSLETSDKFNQNKRPDSSPTKLTISLRNKEAENGVNSVEGNLDIWKPLNFLVEVANRSKCSKSNSQGFETKVEPREVDGSEAQASKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVRQKRESFYGDSSLTPQVVLDASSARHERKAGPIWLSLIASDQEGDVSLPQIPAKYLRIKDRNLPVSFVQKYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIMVLYYARKITVS | 1432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 953470 | 972053 | + | CePI673135_07g000920.1 | Cec07g0092 | 206871 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0092 | 1432 | ProSiteProfiles | Zinc finger RING-type profile. | 1021 | 1062 | IPR001841 | - | |
Cec07g0092 | 1432 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 929 | 980 | IPR045863 | - | |
Cec07g0092 | 1432 | Gene3D | Magnesium transport protein CorA, transmembrane region | 708 | 923 | - | - | |
Cec07g0092 | 1432 | Pfam | Magnesium transporter MRS2-like | 645 | 920 | - | - | |
Cec07g0092 | 1432 | Pfam | WD domain, G-beta repeat | 397 | 432 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | Pfam | WD domain, G-beta repeat | 451 | 475 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | Gene3D | - | 616 | 704 | - | - | |
Cec07g0092 | 1432 | Coils | Coil | 55 | 75 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 36 | 73 | - | - | |
Cec07g0092 | 1432 | SUPERFAMILY | WD40 repeat-like | 273 | 564 | IPR036322 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | SUPERFAMILY | RING/U-box | 1017 | 1086 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 36 | 54 | - | - | |
Cec07g0092 | 1432 | SMART | ring_2 | 1021 | 1061 | IPR001841 | - | |
Cec07g0092 | 1432 | ProSitePatterns | Zinc finger RING-type signature. | 1037 | 1046 | IPR017907 | - | |
Cec07g0092 | 1432 | Gene3D | - | 252 | 567 | IPR015943 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 1149 | 1199 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 55 | 73 | - | - | |
Cec07g0092 | 1432 | Coils | Coil | 796 | 823 | - | - | |
Cec07g0092 | 1432 | CDD | Mrs2_Mfm1p-like | 633 | 990 | IPR039204 | - | |
Cec07g0092 | 1432 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 400 | 435 | - | - | |
Cec07g0092 | 1432 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 400 | 441 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | SMART | WD40_4 | 394 | 432 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | SMART | WD40_4 | 262 | 302 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | SMART | WD40_4 | 435 | 475 | IPR001680 | GO:0005515(InterPro) | |
Cec07g0092 | 1432 | Pfam | Zinc finger, C3HC4 type (RING finger) | 1021 | 1061 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 1151 | 1166 | - | - | |
Cec07g0092 | 1432 | FunFam | U3 small nucleolar RNA-associated protein 18 homolog | 253 | 569 | - | - | |
Cec07g0092 | 1432 | CDD | RING-HC_PCGF | 1019 | 1062 | - | - | |
Cec07g0092 | 1432 | FunFam | Magnesium transporter MRS2-1 | 620 | 704 | - | - | |
Cec07g0092 | 1432 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1004 | 1108 | IPR013083 | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 195 | 220 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 721 | 744 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 1230 | 1297 | - | - | |
Cec07g0092 | 1432 | Gene3D | - | 1306 | 1410 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 1240 | 1288 | - | - | |
Cec07g0092 | 1432 | MobiDBLite | consensus disorder prediction | 1169 | 1199 | - | - | |
Cec07g0092 | 1432 | PANTHER | WD-REPEAT PROTEIN-RELATED | 58 | 567 | IPR045161 | GO:0006364(InterPro)|GO:0032040(PANTHER)|GO:0034388(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1124 | Cec-Chr5:10038779 | Cec07g0092 | Cec-Chr7:953470 | 1.20E-83 | dispersed | |
Cec07g0092 | Cec-Chr7:953470 | Cec10g1297 | Cec-Chr10:27136508 | 1.30E-86 | dispersed | |
Cec02g1294 | Cec-Chr2:29591016 | Cec07g0092 | Cec-Chr7:953470 | 2.10E-285 | transposed | |
Cec02g1750 | Cec-Chr2:35273118 | Cec07g0092 | Cec-Chr7:953470 | 1.60E-110 | wgd | |
Cec05g0545 | Cec-Chr5:4362957 | Cec07g0092 | Cec-Chr7:953470 | 1.00E-59 | wgd | |
Cec06g0671 | Cec-Chr6:7578908 | Cec07g0092 | Cec-Chr7:953470 | 3.80E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0092 | K14553 | - | csv:101208908 | 929.858 |