Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0092 ATGCTCGTCTTCTTCAGGGCTCCAGGAGCTGATTGGAAGATGAGTTTAATATCACAAAATGTTGCTGTAATTAGTAGTATTCAGAAGGTTACAGGGGAGAATATTGTTGGTTCGTCATCTCCATTGAGAAATGGAGATGCTAATGATGTAGAAAACTCTGGTCTAGATACTACTAGGGCAAAAAAGAGAAAGAAAGAACATAAAAAAGAAGATGAACAACAAAAGGAAATCAAGAAGCTTGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGCAAAATGGTTTTAATTCTGAGGAGAAAGGTCCTGCTTTGTACATAATGGACCGCTCTGCAAATAATTCCCTTTCTGCATATGAAGATGATTTTGGGCCCCTACATGAGAGTACGAATGAGGAACCTCAGCAAAGAAAAGCAGTATGGGTCGACGAGGAAGAGGAGAAGGCCACGGTTAATATTACTAATGTTAGTAGACTGAGAAAGTTGAGGAAAGAAGAAGATGAGAATTCGATTTCAGGCTCAGAGTATGTGTCAAGATTGAGGGCTCAACATGCCAAGCTAAACCCAGGCACCGAGTGGGCTCAACTTGATGCGCAATCCACGGGTGACAGTGATGATGATGATCGATCATCAGATGATGAAAATGCAGTTGCATTGGCTAATGGTTATGATAATGTTGATTCTATTGATGATATCCTTCGAACGAGTGAGAATCTCGTTGTGAAGAGAGGAGCAAAATTGTTACCTGGTCTTCTTGAATACACAAGACTTGTAGATGCTAACGCAGAGGAGCCATCTAATGGTCCTGCCAATTCGGTTCAGTTTCATTGCAATGCTCAGTTACTGTTAGCCACTGGGTTGGATCGAAGGCTTAGATTTTTTCAGATTGATGGCAAACGAAATACCAAAATTCAAAGCATTTTCCTTGAGGATTGCCCTATACGAAAGGCATCATTCTTGCCTGATGGATCTCAGGTTATCATAGCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATTTAGTGAAAGCAAAAGTAGATAAAATTGGCCCTCTTGTAGGTCGAGACGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTTGTTGGTAATGAAGGCTACATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATCGGAACGCTTAAGATGAATGGAAGCGTTCGTTCTTTGGCATTCGCAGACAATGGACAACAGCTATTGAGCTCCGGCGGTGACGGGCAGGTCTACCATTGGGATTTACGAACAAGAACGTGCATACACAAGGGTGTCGACGAAGGTTGCATCAATGGTACTGCATTATGTACATCTCCAAATGGAGCATTGTTTGCAGCTGGTTCTGACAGTGGGATTGTTAACATCTACAATAGACAAGAATTCTTAGGGGGAAAGAAGAAGCCATTGAAAGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTTAAATTCAATCATGATGCTCAAATTTTGGCCATCTGTTCAAGAATGAAGAAAAGTAGTTTGAAGTTGATACATGTTCCTTCTTTTACGGTATTTTCGAACTGGCCACCGCCGAAGAAGAACCTTCAATACCCTTCATGTTTGGATTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGTTTCTTCTTCCATTTGTTTTCTGTACGCATTGGTCGTACAAGAAGCGCAATAATAATGTTTGTGGGATCGAAATCTTAGCTTCAGAGATGGCTGGAGATGGATTTGTAATCCCTGTGGAATCTCAGGTGAGTTCGGTGAAGAAGAAGAAGAAGACGACGACGACGACGACAACGAAGAAAAAGAATACTGCGATTTCCACGAGCTGGGTTTCGTTGGACCATGAAGGAAGGAGTACGATTTTGGATGTGGATAAGTATGCGATTATGCAAAGAGTTCAGATTAATGCTAGAGATCTTCGGCTTCTCGATCCTCTCTTGTCGTATCCTTCCACTATCTTGGGCAGAGAAAGAGTGATTGTTCTTAATTTGGAGCACATCAAGTCAATTATCACTGCAGACGAGGTGCTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAACTGCAGAGACGGTTGCCTTCCACAAATTCCATATACCAAGGACAAGGGGAAGAAGAAGAGCCTTCTACCACGCAAAATGAGTCCGCTGAAAACGAATTTCCATTTGAATTCCGCGCTTTAGAGGTCGCACTCGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTAGAGACTGATACATATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGACCGAGTGCGCAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGACGACGACGACATGGCAGAACTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGTGGCTCTGGGACTCCAATTTGGTTTCTTGCGTCTCCTAAGGACTATTCAAAGATGTCTAAAACTAGTAGAGCAAGTGTGATTACTATTCGAGGAGAGAATGATGTGGAGGAACTAGAAATGCTACTCGAGGCTTATTTTATGCAAATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAGTACATCGATGACACGGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAACTTATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATATTTGGAATGAATATCCCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCGTATGCGCGATACAAAGAGTTGAGGTACGTGGTTGAAGTTTTTGATTCTTTTTGGGGTATGGCGAATCGGGTTGTTAAAGTGAAGAGGGAAGCCATTGCAGCATGCATAACTTGCCCACTTTGTAATAAGCTCTTGAAAGAAGCAACCACCATTTCTGAATGTCTTCATACTTTTTGCAGAAAGTGCATATCCGATAAGATTTCTGATGAGGAACTAGAAAACTGTCCAGTATGTAATATTGACCTCGGGTGTGTCCCACTGGAGAAATTAAGGCCAGACCACAATCTAGAAGATTTAAGGGCCAAGATTTTCCCTAGTAAAAGGAGAAAATTCAAGACGCCGGAAGTTGCTCCTGTTATTCTACCACCGGTTAGAAGAAAGGAAAGATCACTTTCCTCGTTGGTGGTCAATAGTCCAAGAGTGTCAAGTCATGCTACCGCAACTGGAAGAAGAACAGCAGCTGCTGCTGCAAGAATTGGTTCTATTTTACGAACACCAAGAGTCTCTTCTGAGAAGCGAGTGAAGAAAGAGGATGATTCCATGGACGACGGTTCAGAGAGCTCAAGTTCTCTTGAGACATCAGACAAATTCAATCAGAATAAAAGGCCGGATTCCAGTCCTACCAAGTTGACCATATCTTTGCGCAATAAAGAAGCCGAAAATGGTGTTAACTCAGTGGAAGGGAACTTGGATATCTGGAAACCTCTAAATTTCTTAGTTGAGGTTGCAAATAGGAGTAAATGTTCCAAATCTAATTCACAAGGATTCGAAACTAAAGTCGAGCCTAGAGAAGTCGATGGAAGTGAAGCTCAGGCCAGCAAATCTAGAAATAGGGAAGGCAAACGCAAGCAAAAACGTGAGAATGGAAAAACTAGAGCAGACCCAGTATCTCCAGAAACTGAAAAACCTAAGAAACTGCGTAGGGTCCGCCAGAAAAGGGAATCTTTTTATGGGGACTCCAGCCTTACACCTCAGGTTGTGTTGGATGCCTCTAGTGCTCGGCATGAAAGAAAAGCCGGTCCGATTTGGCTCTCACTCATAGCCTCTGATCAGGAAGGAGATGTATCGTTGCCCCAAATTCCTGCTAAGTATTTGAGAATAAAGGATAGAAACTTGCCAGTATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCTCCCAAGTGAATCAGAGGTTGAAGTCAAGTGTATGGGACATCCAGTAGTTCCCACTCTGGATTTGCATAGTTTAGTTGATTTGTGGCTACAAACAGCATCAACCTCGGAAAAGATCCCGGCATCGATCGGCTCATCGGCGGAGGATTTCATTATGGTTCTCTACTATGCTAGAAAGATCACAGTTTCTTGA 4299 42.31 MLVFFRAPGADWKMSLISQNVAVISSIQKVTGENIVGSSSPLRNGDANDVENSGLDTTRAKKRKKEHKKEDEQQKEIKKLENFLFGSLYSPVEFGKDEEQNGFNSEEKGPALYIMDRSANNSLSAYEDDFGPLHESTNEEPQQRKAVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSTGDSDDDDRSSDDENAVALANGYDNVDSIDDILRTSENLVVKRGAKLLPGLLEYTRLVDANAEEPSNGPANSVQFHCNAQLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGRDEKSLEVFEVSPDSSTVAFVGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADNGQQLLSSGGDGQVYHWDLRTRTCIHKGVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTVFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKFLLPFVFCTHWSYKKRNNNVCGIEILASEMAGDGFVIPVESQVSSVKKKKKTTTTTTTKKKNTAISTSWVSLDHEGRSTILDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSIYQGQGEEEEPSTTQNESAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKMSKTSRASVITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARYKELRYVVEVFDSFWGMANRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEELENCPVCNIDLGCVPLEKLRPDHNLEDLRAKIFPSKRRKFKTPEVAPVILPPVRRKERSLSSLVVNSPRVSSHATATGRRTAAAAARIGSILRTPRVSSEKRVKKEDDSMDDGSESSSSLETSDKFNQNKRPDSSPTKLTISLRNKEAENGVNSVEGNLDIWKPLNFLVEVANRSKCSKSNSQGFETKVEPREVDGSEAQASKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVRQKRESFYGDSSLTPQVVLDASSARHERKAGPIWLSLIASDQEGDVSLPQIPAKYLRIKDRNLPVSFVQKYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIMVLYYARKITVS 1432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 953470 972053 + CePI673135_07g000920.1 Cec07g0092 206871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0092 1432 ProSiteProfiles Zinc finger RING-type profile. 1021 1062 IPR001841 -
Cec07g0092 1432 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 929 980 IPR045863 -
Cec07g0092 1432 Gene3D Magnesium transport protein CorA, transmembrane region 708 923 - -
Cec07g0092 1432 Pfam Magnesium transporter MRS2-like 645 920 - -
Cec07g0092 1432 Pfam WD domain, G-beta repeat 397 432 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 Pfam WD domain, G-beta repeat 451 475 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 Gene3D - 616 704 - -
Cec07g0092 1432 Coils Coil 55 75 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 36 73 - -
Cec07g0092 1432 SUPERFAMILY WD40 repeat-like 273 564 IPR036322 GO:0005515(InterPro)
Cec07g0092 1432 SUPERFAMILY RING/U-box 1017 1086 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 36 54 - -
Cec07g0092 1432 SMART ring_2 1021 1061 IPR001841 -
Cec07g0092 1432 ProSitePatterns Zinc finger RING-type signature. 1037 1046 IPR017907 -
Cec07g0092 1432 Gene3D - 252 567 IPR015943 GO:0005515(InterPro)
Cec07g0092 1432 MobiDBLite consensus disorder prediction 1149 1199 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 55 73 - -
Cec07g0092 1432 Coils Coil 796 823 - -
Cec07g0092 1432 CDD Mrs2_Mfm1p-like 633 990 IPR039204 -
Cec07g0092 1432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 400 435 - -
Cec07g0092 1432 ProSiteProfiles Trp-Asp (WD) repeats profile. 400 441 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 SMART WD40_4 394 432 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 SMART WD40_4 262 302 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 SMART WD40_4 435 475 IPR001680 GO:0005515(InterPro)
Cec07g0092 1432 Pfam Zinc finger, C3HC4 type (RING finger) 1021 1061 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 1151 1166 - -
Cec07g0092 1432 FunFam U3 small nucleolar RNA-associated protein 18 homolog 253 569 - -
Cec07g0092 1432 CDD RING-HC_PCGF 1019 1062 - -
Cec07g0092 1432 FunFam Magnesium transporter MRS2-1 620 704 - -
Cec07g0092 1432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1004 1108 IPR013083 -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 195 220 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 721 744 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 1230 1297 - -
Cec07g0092 1432 Gene3D - 1306 1410 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 1240 1288 - -
Cec07g0092 1432 MobiDBLite consensus disorder prediction 1169 1199 - -
Cec07g0092 1432 PANTHER WD-REPEAT PROTEIN-RELATED 58 567 IPR045161 GO:0006364(InterPro)|GO:0032040(PANTHER)|GO:0034388(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1124 Cec-Chr5:10038779 Cec07g0092 Cec-Chr7:953470 1.20E-83 dispersed
Cec07g0092 Cec-Chr7:953470 Cec10g1297 Cec-Chr10:27136508 1.30E-86 dispersed
Cec02g1294 Cec-Chr2:29591016 Cec07g0092 Cec-Chr7:953470 2.10E-285 transposed
Cec02g1750 Cec-Chr2:35273118 Cec07g0092 Cec-Chr7:953470 1.60E-110 wgd
Cec05g0545 Cec-Chr5:4362957 Cec07g0092 Cec-Chr7:953470 1.00E-59 wgd
Cec06g0671 Cec-Chr6:7578908 Cec07g0092 Cec-Chr7:953470 3.80E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0092 K14553 - csv:101208908 929.858