Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0096 ATGGAAGAGGTTGAAGAAGCTAACAAATCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTAGTTCAACCTCCTCAAGACCAGCTTCATTTCAGGAATCTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTTATTTCTCTCTTAAATTCTGGTTTTGGTCATGCCAGAGTTAGAAAATTCAACAAGATACCTCTCCCTTTGCCTCAAAAATCCCTCTTAGATTCCCCAAATTACACTCCACATCCTCCAAACAAAAATCTTTACCCTTTTCACTCTGGTTTGAATGGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTAGAATTGAGTCCAAATGACAAGAATTCCCTCCAAATTCCCAAACAATCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCAGAAATGATGTTTCTAAGTAATAACAGTGGGATGAACCTGAATTTTGACACATCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGCCGACGGAAGCTCGTTCCATTTGATTGGACCGTCGTCAACAACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAAAGGAGATGAAGGAAGCTTGAAATGTGGAAGTACTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCGGCGAGAAAGCATGTCGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTATGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG 1026 41.62 MEEVEEANKSAIESCHGVLNLLVQPPQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRKFNKIPLPLPQKSLLDSPNYTPHPPNKNLYPFHSGLNGKVSIFLGNPDLELSPNDKNSLQIPKQSPSLNFSFPQQQQQQQQQQQQQQQRILAHQKQMKQQAEMMFLSNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTTTTSADNKRKFSAKGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 997366 999079 + CePI673135_07g000960.1 Cec07g0096 206875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0096 341 SMART WRKY_cls 273 333 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0096 341 MobiDBLite consensus disorder prediction 116 157 - -
Cec07g0096 341 FunFam WRKY transcription factor 65 257 334 - -
Cec07g0096 341 Gene3D WRKY domain 260 333 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0096 341 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 337 IPR044810 GO:0003700(InterPro)
Cec07g0096 341 MobiDBLite consensus disorder prediction 213 234 - -
Cec07g0096 341 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0096 341 SUPERFAMILY WRKY DNA-binding domain 271 333 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0096 341 Pfam WRKY DNA -binding domain 275 332 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0096 341 Pfam Plant zinc cluster domain 232 271 IPR018872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1579 Cec-Chr6:29397387 Cec07g0096 Cec-Chr7:997366 1.20E-39 dispersed
Cec07g0096 Cec-Chr7:997366 Cec07g0301 Cec-Chr7:2937772 1.20E-22 dispersed
Cec07g0096 Cec-Chr7:997366 Cec09g0731 Cec-Chr9:6658536 2.80E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29859 PF03106 WRKY 1.20E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0096 - - - 0.0