Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0122 ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGTGGTGGAGGTGGCAGTGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGTTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCCCTCCAACAACAGGTGTCATATTTACAAACGCAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGGCAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCAGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAAAATCACCTTCATGAAAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCATTTCCTAGAAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA 714 40.9 MASSSSSSSANTSVSGSGGGGGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVSYLQTQLMQAKAQLAQTLMDSGGNMEIQWAGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLESAANNDEALLFINNQNHLHESQSRSPEESQFLQPFPRKKLPSSHADLGELQALALRMMRN 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1292853 1294254 + CePI673135_07g001220.1 Cec07g0122 206901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0122 237 ProSiteProfiles LOB domain profile. 27 129 IPR004883 -
Cec07g0122 237 Pfam Lateral organ boundaries (LOB) domain 28 126 IPR004883 -
Cec07g0122 237 MobiDBLite consensus disorder prediction 1 20 - -
Cec07g0122 237 MobiDBLite consensus disorder prediction 195 219 - -
Cec07g0122 237 MobiDBLite consensus disorder prediction 1 25 - -
Cec07g0122 237 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 200 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0256 Cec-Chr5:2098141 Cec07g0122 Cec-Chr7:1292853 5.40E-39 dispersed
Cec06g0038 Cec-Chr6:382522 Cec07g0122 Cec-Chr7:1292853 1.30E-42 dispersed
Cec07g0122 Cec-Chr7:1292853 Cec09g0783 Cec-Chr9:7182849 1.90E-38 dispersed
Cec07g0122 Cec-Chr7:1292853 Cec07g0123 Cec-Chr7:1302773 3.40E-40 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29863 PF03195 LOB 2.10E-36 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0122 K13944 - csv:101214521 364.77