Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0123 | ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCGTCTGGTAACGGGGGCAGAGTGAATGAGAAGATTAATAATAAAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAGTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAACGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGGTGA | 717 | 40.03 | MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGRVNEKINNKKVPSHPQDLHSWFQSEQPVEFNPNPTPNNNSASNPYYDENYCIMVNSQSNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRHW | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1302773 | 1303994 | - | CePI673135_07g001230.1 | Cec07g0123 | 206902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0123 | 238 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Cec07g0123 | 238 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 105 | IPR004883 | - | |
Cec07g0123 | 238 | Coils | Coil | 87 | 114 | - | - | |
Cec07g0123 | 238 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 232 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0039 | Cec-Chr6:400104 | Cec07g0123 | Cec-Chr7:1302773 | 1.20E-34 | dispersed | |
Cec07g0123 | Cec-Chr7:1302773 | Cec09g0783 | Cec-Chr9:7182849 | 2.60E-43 | dispersed | |
Cec07g0122 | Cec-Chr7:1292853 | Cec07g0123 | Cec-Chr7:1302773 | 3.40E-40 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29864 | PF03195 | LOB | 9.90E-36 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0123 | K13945 | - | csv:101214764 | 406.757 |