Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0123 ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCGTCTGGTAACGGGGGCAGAGTGAATGAGAAGATTAATAATAAAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAGTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAACGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGGTGA 717 40.03 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGRVNEKINNKKVPSHPQDLHSWFQSEQPVEFNPNPTPNNNSASNPYYDENYCIMVNSQSNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRHW 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1302773 1303994 - CePI673135_07g001230.1 Cec07g0123 206902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0123 238 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Cec07g0123 238 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Cec07g0123 238 Coils Coil 87 114 - -
Cec07g0123 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 232 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0039 Cec-Chr6:400104 Cec07g0123 Cec-Chr7:1302773 1.20E-34 dispersed
Cec07g0123 Cec-Chr7:1302773 Cec09g0783 Cec-Chr9:7182849 2.60E-43 dispersed
Cec07g0122 Cec-Chr7:1292853 Cec07g0123 Cec-Chr7:1302773 3.40E-40 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29864 PF03195 LOB 9.90E-36 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0123 K13945 - csv:101214764 406.757