Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0130 ATGGAATCCTCTTATCTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAATTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACCACACGAAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGAAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTACGATCAAGCGGCATTTTCGATGAGAGGGGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTTGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA 660 46.06 MESSYLSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISPHEEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1377182 1377841 + CePI673135_07g001300.1 Cec07g0130 206909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0130 219 MobiDBLite consensus disorder prediction 1 21 - -
Cec07g0130 219 Pfam AP2 domain 85 135 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 SMART rav1_2 85 149 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 Gene3D AP2/ERF domain 84 145 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 FunFam Ethylene-responsive transcription factor 2 84 145 - -
Cec07g0130 219 SUPERFAMILY DNA-binding domain 85 145 IPR016177 GO:0003677(InterPro)
Cec07g0130 219 CDD AP2 86 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g0130 219 PANTHER DNA-BINDING DOMAIN 47 193 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0707 Cec-Chr6:8106583 Cec07g0130 Cec-Chr7:1377182 2.30E-41 dispersed
Cec07g0130 Cec-Chr7:1377182 Cec09g0747 Cec-Chr9:6822629 5.80E-42 dispersed
Cec05g0501 Cec-Chr5:3996755 Cec07g0130 Cec-Chr7:1377182 3.50E-42 wgd
Cec06g0706 Cec-Chr6:8054940 Cec07g0130 Cec-Chr7:1377182 2.50E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29865 PF00847 AP2 1.20E-14 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0130 K14516 - csv:101220325 299.286