Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0156 ATGCATGCCACGTGGCAAAAGTTATGGGTATTGCTGTTTCTGGATTTTGCCTTCCCTCGCTCTTCTTTTACTTTTGGGAAATTAAAAGATTTTTGGCTGCAGTCAAACAATATGAAGAGTGACGTTAAGATTAAAAGGGGGAGGAGCGCTGGAAAAAGGGAGAATATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAAAACAGCTGGGGATGATATGATTCCTGCAGCAGAATCGCCTTCTGCTTTCGAGAATTCAGGAAGTGGACGCTCTTCACGGACTGGGGAGATCGTCAAGAAGCCAGAAATTGGCAATATAGAAGAAGCTGAGTCTTCGCTTCGTGAGAGTGGTTGCTTAAATTATGAGGAAGCAAGAGCATTGCTAGGAAGATATGAATATCAAAAAGGAAATATTGAAGCTGCTCTTCATGTATTTGAAGGAATAGACATCACTGCTATAACTAGTAAGATAATGATCTCCATAGCTAGAAGAGGAGACCGTCCACAGAGACGATCACAGAATTTTACTGCCCCGCCAATGTCTATGCATGCTGTCAGTTTACTCTTGGAAGCCATCCTTCTGAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTCGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGCTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGAGACAGTTACAAAGGCCGTGGAGCTGCTACCAGAGTTATGGAAGCTAGCTGATGCTTCTCAAGAAGCGATCCTTTCATACCGGCGAGCACTTCTTCATCAGTGGAACCTTGATGCAGGAACCACTGCTCGAATCCAGAAAGAGTTTGCCATTTTTCTTCTGTACAGTGGATGTGAAGCTTGCCCTCCGAATCTCCGGTCCCAAATGGACAGCTCATTTGTACCAAAAAACAATATTGAAGAAGCTATACTCTTATTTATGATACTACTTAGAAAAGTTGTTCTTAAGAGGATTGATTGGGATGCATCAATCTTGGATCATCTCTCCTTTGCTCTAACAATATCAGGGGATACAAGGGCTTTAGCAGGTCAAATAGAGGAATTGCCTCCTGGGATTCTACATCGACAAGAAAGGTATCATGCTCTAGCTCTATGTTACTATGGAGCGTGTGAAAACTTGACTGCTTTGAATCTGTTGAGGAAAGTGTTGGGTAATCATGAGGATCCTAAATCGCTTCCTGCTTTATTGATGGCGTCGAAGATTTGTGGAGAGAACTGCGACCTTGCTGAAGAGGGAACGAGTTTTGCTCATAGAGCTCTTCAAAACTTGGATCATGGATGTGATCAATTGGAAGGTGTTGCCAATTGTTTGTTGGGTGTCTCACTGTCTGTATATTCTAAATCTGCCACTGCAGATTCCGAGAAGTCCACCAGACAATCTGAGGCAATTGAGGCCTTGGAAGCCGCACGGAAGACGACTAGAACAGCTGACCCTAATGTCCTCTATCATTTGAGTCTTGAATATGCTGACGAGAGGAAGTTAGATTCAGCACTTTATTATGCAAAGAAGTGTCTCAAGCTGGAAGGTGGATGTAATGTTAAAACTTGGTTACTACTGGCTAGAATTCTCTCTGCCCAAAAACGATTTACAGATAGCGAAAGTATTATAAATGCAGCTCTAGATCAGACAGGGAAATGGGAGCAAGCCGAGTTGCTTCAAACGAAAGCAAAGCTTCTAATTGCACAGGATGAGTTTAAAGGTGCTATTGAGACTTATAGTCAATTACTCGCTGTTTTTCAAGTTCAGAGTAAAAATTTCAGTTTGGGAGATAAGAAGCTACATAAGAGCAGCAGAAATCATGCTAGAAGATTGCAATTGGAAGTGTGGCATGATCTAGCTGTAGTCTACATAAGGCTCTCACAATGGCACGACGCCGAGGCCTGCCTTTCAAAGTCGAAGGCCATCTCTTCTCATTCGGCCCCTAGATGCCACATTACAGGTATGCTTTATGAAGCAAAAAGCTTGTATAAAGAAGCTCTGAAAGCTTTTATGGCTGCTCTGGACACTGATCCCGTTCATGTCCCGAGCTTGGTCTCATCTGCGGTGGTTATCAGACATCTCGGCCACCAATCGCATCCCGTCATTCGCAGCTTTTTGATGGATGCTCTACGGCTCGATCAAACGAACCATGCTGCGTGGTACAATCTTGGGCTATTCTACAAGTCTGAAGGAACCAAGTCTTCATTAGCAGAAGCTGTTGAATGTTTTGAGGCTGCAACTTTTCTTGAAGAGTCTGCTCCTGTTGAACCCTTTAGATAA 2316 43.18 MHATWQKLWVLLFLDFAFPRSSFTFGKLKDFWLQSNNMKSDVKIKRGRSAGKRENIRKIMKCLCSGEKTAGDDMIPAAESPSAFENSGSGRSSRTGEIVKKPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAITSKIMISIARRGDRPQRRSQNFTAPPMSMHAVSLLLEAILLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGADCKLQETVTKAVELLPELWKLADASQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYSGCEACPPNLRSQMDSSFVPKNNIEEAILLFMILLRKVVLKRIDWDASILDHLSFALTISGDTRALAGQIEELPPGILHRQERYHALALCYYGACENLTALNLLRKVLGNHEDPKSLPALLMASKICGENCDLAEEGTSFAHRALQNLDHGCDQLEGVANCLLGVSLSVYSKSATADSEKSTRQSEAIEALEAARKTTRTADPNVLYHLSLEYADERKLDSALYYAKKCLKLEGGCNVKTWLLLARILSAQKRFTDSESIINAALDQTGKWEQAELLQTKAKLLIAQDEFKGAIETYSQLLAVFQVQSKNFSLGDKKLHKSSRNHARRLQLEVWHDLAVVYIRLSQWHDAEACLSKSKAISSHSAPRCHITGMLYEAKSLYKEALKAFMAALDTDPVHVPSLVSSAVVIRHLGHQSHPVIRSFLMDALRLDQTNHAAWYNLGLFYKSEGTKSSLAEAVECFEAATFLEESAPVEPFR 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1670563 1675257 + CePI673135_07g001560.1 Cec07g0156 206935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0156 771 SMART tpr_5 659 692 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 568 601 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 190 223 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 532 565 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 497 530 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 625 658 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 SMART tpr_5 729 765 IPR019734 GO:0005515(InterPro)
Cec07g0156 771 Gene3D Tetratricopeptide repeat domain 100 609 IPR011990 GO:0005515(InterPro)
Cec07g0156 771 Pfam Tetratricopeptide repeat 509 574 - -
Cec07g0156 771 Gene3D Tetratricopeptide repeat domain 610 765 IPR011990 GO:0005515(InterPro)
Cec07g0156 771 SUPERFAMILY TPR-like 566 743 IPR011990 GO:0005515(InterPro)
Cec07g0156 771 SUPERFAMILY TPR-like 477 597 IPR011990 GO:0005515(InterPro)
Cec07g0156 771 MobiDBLite consensus disorder prediction 79 102 - -
Cec07g0156 771 PANTHER PROTEIN NPG1 51 771 IPR043376 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1713 Cec-Chr8:28273658 Cec07g0156 Cec-Chr7:1670563 6.70E-156 transposed
Cec11g1523 Cec-Chr11:29486648 Cec07g0156 Cec-Chr7:1670563 1.90E-23 transposed
Cec11g1716 Cec-Chr11:31412841 Cec07g0156 Cec-Chr7:1670563 2.00E-168 transposed
Cec05g0473 Cec-Chr5:3786298 Cec07g0156 Cec-Chr7:1670563 5.70E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0156 K21843 - csv:101223229 1333.16