Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0185 ATGCCTTTCTCGACTTTGCACCTTCTTTTGGTTCTTCATGCATTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCAGTTTCACCACACATATACTTATCTCCTTCCTTACAGCCAAACCTGCAAACAATGACCACGGAAATGTCAACAGAGCATGCAAGGTTGGAGTCGATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGGTAACTGGATATTTAAGTCTTCTTTGGGGCCATCTACTGCTCCTGCACCCTCTCCAGGTCCTAGGATTGCACCCTTACCCATCCGACATCATCGACGACGTCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTCCCTGTGATGAACGAGCTTGAAAGTGAGATTGCAGTGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTACAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACAACTGCAGTTCTGACATACAGAAGGTTTTGGGATAAAAAAGTTCATTTAAATATGACACTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCCCCGCCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCCATTACTGCAAATTTCATTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTCTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCATCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCCTAATGTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACTCGGGACAATCAGAATAGAGACCGTGAATTTATTGCCGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCACGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGCGTTATTCACCGTGATTTCAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATCTCAACAAGGGTGATGGGGACTTTCGGGTATGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTACAGTTATGGAGTCGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAACCTTGTAACATGGGCGCGACCTCTATTGACCAGTAGAGAAGGCTTGGAGCAACTAGTGGATCCTTCTCTAGCTGGTACTTACGACTTCGATGACATGGCCAAGGTGGCTGCCATAGCTTCAATGTGCGTTCACCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAACTAATATACAACGACACAGACGAGACGTGTGCAGATTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCAGATTTCAAAGGCGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCCGGTGGCCTTACACCTCGACTGACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACCGCCCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCATTACGAACCGCTCGAAGCAAGCCTGCGTTCTATAGATTTTCAGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGGCCTCCTTGGAACAGCAGTGGGCTGAGAATGTCGTCGTCAACCTCCTCCTCCTCCGTTTCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTATTACGTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCACAAGCTTTAAGGTACAAGGTGGAGGAAATGTAGGTAATGCTTTAACTTCTGCGGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGAGCATAATGGAGGAGCTAGAAGCTGATGGCATAGATACATCATTTCTTGTAGCAAGCTCTTCATAA 2640 45.08 MPFSTLHLLLVLHAFDLLFSCSGQSSVSPHIYLSPSLQPNLQTMTTEMSTEHARLESISFSFVPSKLRGNWIFKSSLGPSTAPAPSPGPRIAPLPIRHHRRRRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATTDSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFINKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLMSTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGFLSRPPWNSSGLRMSSSTSSSSVSISLPENRVVLGVGITSVDFLAAVASYPNPDDKIRTTSFKVQGGGNVGNALTSAARLGLTPRIISKVADDTQGRSIMEELEADGIDTSFLVASSS 879
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1885302 1894977 + CePI673135_07g001850.1 Cec07g0185 206964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0185 879 SUPERFAMILY Protein kinase-like (PK-like) 355 650 IPR011009 -
Cec07g0185 879 Gene3D Transferase(Phosphotransferase) domain 1 447 669 - -
Cec07g0185 879 Gene3D Phosphorylase Kinase; domain 1 342 446 - -
Cec07g0185 879 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0185 879 CDD STKc_IRAK 377 646 - -
Cec07g0185 879 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524(InterPro)
Cec07g0185 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0185 879 FunFam receptor-like serine/threonine-protein kinase ALE2 344 446 - -
Cec07g0185 879 Gene3D - 793 879 IPR029056 -
Cec07g0185 879 PANTHER OS01G0750732 PROTEIN 121 668 IPR050885 -
Cec07g0185 879 SUPERFAMILY Ribokinase-like 794 876 IPR029056 -
Cec07g0185 879 FunFam Receptor-like serine/threonine-protein kinase ALE2 447 664 - -
Cec07g0185 879 Pfam pfkB family carbohydrate kinase 797 876 IPR011611 -
Cec07g0185 879 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1616 Cec-Chr3:34311457 Cec07g0185 Cec-Chr7:1885302 3.70E-177 dispersed
Cec07g0185 Cec-Chr7:1885302 Cec09g0063 Cec-Chr9:541482 4.50E-170 dispersed
Cec10g1782 Cec-Chr10:32547599 Cec07g0185 Cec-Chr7:1885302 3.90E-71 dispersed
Cec07g0185 Cec-Chr7:1885302 Cec07g0186 Cec-Chr7:1895746 1.90E-44 tandem
Cec07g1449 Cec-Chr7:30094003 Cec07g0185 Cec-Chr7:1885302 3.80E-55 transposed
Cec08g0631 Cec-Chr8:17913844 Cec07g0185 Cec-Chr7:1885302 5.60E-68 transposed
Cec10g1162 Cec-Chr10:25380428 Cec07g0185 Cec-Chr7:1885302 5.00E-106 transposed
Cec06g0794 Cec-Chr6:9499934 Cec07g0185 Cec-Chr7:1885302 6.70E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72116 PF07714 PK_Tyr_Ser-Thr 2.80E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0185 - - - 0.0