Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0263 ATGGCACCGCTCTTAAACGATCACTTCAGTTTTCAAACGCCAGAAAATGAGGCTGTTATTACTAAAAAAATTCCTCGCTCTGAACACACCAACAAATATCCTACTTGGTATTCACCAGATACAGGAATTTGTCGTAGTGTTCATGCCCCCAGAGAAGTTCCCTCTGACCCATTTCTTGATGTTGTCTCCTTCATCTTCTCCTTCCAACACAATGGACATTCAGCTCTCATTGATTCCTCAACTGGAAATTCAATATCTTACAGAGAAATGTTTCGTATGGTCAAGTCTGTGGCTTCCGGCCTCCACAAGTTGGGTATATCACAAGGGGATGTAGTTTTGCTTGTGATACCAAATTCCATTTTTTATCCCATTATTCTTTTGGGTGTCCTGTACTTGGGAGCAGTTATTACAACCATGTTTCCTCAAAGCAGTTCCGCAGAAATCAAGAAACGAACCAGTGATTGCAATGTGCGTTTCGCTTTTACAATGACTCAGAAAATTAAGAATTTTGAAGCACTGGGAATTCAGGCAATTGGGGTACCAGAAAATACGAATTTGGACTTGATGAGGCCTATGGGATTTTCTTCTTTTTATGAGCTTGTTTCAGGTGGTTCTGATTTGAATAAAAGACCAGTGATTAGACAAGAAGATACGGCTGCTATATTGTTTTCTTCAGGTACTACTGGAGTGAGCAAAGGGGTTATGTTAACACATAGAAATTTCCTATCTACGATTGAGCTTTTTGTCCGGTTTGAAGCTTCACAGTATGAATATTTGCCTACAGAGAATGTGTATTTGGCTGCTATACCAATGTTTCATATATATGGTCTCTCCATTTTTGTGATGGGATTAATGTCATTGGGGTCTAGTGTTGTTGTAATGAGCAAATTTGATGTCAAAGAGGTGGTCAAGGCTATTGACAGATTTAAAGTCACACATTTTCCAGTTGTTCCACCAATAATGACAACTATGGCTAGGACTGCAGAGAAAATTGGTGTCCATAGATTTAGAAGTTTGAAACAAGTTTCTTGTGGGGCTGCTTCTTTGAACAAGAAGACCATTGACGATTTTGTGCAGGCTCTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACTGAGTCCACAGCTGTAGGAACCCGCGGCTTCAATACCAAAAATATTAGAAATTATTTGTCAGTGGGACTTTTAGCTCCAAACACAGAAGCTAAAGTAGTTGATTGGGTTACCGGATCTTTCGTGCCTCCTGGTAAAACTGGCGAACTTTTTCTACGCGGACCTGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGCAACAATGTCCACAATAGACCAAGAAAATTGGCTACATACTGGAGACATTGTCTACTTTGACCGAGAAGGATACTTACATGTTGTTGACCGTTTGAAGGAGGTTATAAAGTATAAAGGCTTTCAGATTGCTCCTACTGATTTAGAAGCTGTGGTGATCACACATCCAGAAGTTCTTGATACTGCAGTAACAGCGGCCAAAGATGAAGAATGTGGAGAGATTCCAGTGGCATTTGTGGTAAAGAAGCCAGGAAGCACACTCTCACAAAAAGATGTTATTGATTATGTTGCTCAACAGGTTGCACCATATAAAAAAATCAGAAAAGTGGTTTTTACAGAATCAATACCAAAATCTGCTGCTGGCAAAGTACTTCGGGGACCATTCTTCAAGGTTTCGTCTCAATTCATATTTAGCCGCGAGCAATCTACGTTTGTGCTGACCGTCCAAGCATCAAAAGAGGGGATTGGGGATTGGTCCCTGGGCCCTAAGTTGCCCGAAGCAAGGATCCTTTTGCTTACCGATAAAAGAATGCCCTATCGGTCGAGCTGCGAAGCTCCTCTCCCTATCACTCACTTTTTTCTGCTAATGTGCAGCGGCGAGGAGCCCACTGGTTGGGTTCTTCGATTCTATTGA 1947 41.45 MAPLLNDHFSFQTPENEAVITKKIPRSEHTNKYPTWYSPDTGICRSVHAPREVPSDPFLDVVSFIFSFQHNGHSALIDSSTGNSISYREMFRMVKSVASGLHKLGISQGDVVLLVIPNSIFYPIILLGVLYLGAVITTMFPQSSSAEIKKRTSDCNVRFAFTMTQKIKNFEALGIQAIGVPENTNLDLMRPMGFSSFYELVSGGSDLNKRPVIRQEDTAAILFSSGTTGVSKGVMLTHRNFLSTIELFVRFEASQYEYLPTENVYLAAIPMFHIYGLSIFVMGLMSLGSSVVVMSKFDVKEVVKAIDRFKVTHFPVVPPIMTTMARTAEKIGVHRFRSLKQVSCGAASLNKKTIDDFVQALPHVDFIQGYGMTESTAVGTRGFNTKNIRNYLSVGLLAPNTEAKVVDWVTGSFVPPGKTGELFLRGPGSMKGYLNNPEATMSTIDQENWLHTGDIVYFDREGYLHVVDRLKEVIKYKGFQIAPTDLEAVVITHPEVLDTAVTAAKDEECGEIPVAFVVKKPGSTLSQKDVIDYVAQQVAPYKKIRKVVFTESIPKSAAGKVLRGPFFKVSSQFIFSREQSTFVLTVQASKEGIGDWSLGPKLPEARILLLTDKRMPYRSSCEAPLPITHFFLLMCSGEEPTGWVLRFY 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2578381 2583215 - CePI673135_07g002630.1 Cec07g0263 207042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0263 648 FunFam 4-coumarate--CoA ligase 2 472 572 - -
Cec07g0263 648 FunFam Long-chain-fatty-acid--CoA ligase FadD 49 471 - -
Cec07g0263 648 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Cec07g0263 648 Pfam AMP-binding enzyme 70 434 IPR000873 -
Cec07g0263 648 Gene3D - 472 569 IPR045851 -
Cec07g0263 648 CDD 4CL 53 563 - -
Cec07g0263 648 Gene3D - 47 471 IPR042099 -
Cec07g0263 648 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Cec07g0263 648 SUPERFAMILY Acetyl-CoA synthetase-like 69 568 - -
Cec07g0263 648 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 563 - GO:0005777(PANTHER)|GO:0006744(PANTHER)|GO:0016405(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0263 Cec-Chr7:2578381 Cec10g2018 Cec-Chr10:34944164 7.60E-106 dispersed
Cec07g0263 Cec-Chr7:2578381 Cec06g1526 Cec-Chr6:28765352 6.40E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0263 K01904 - csv:101219578 997.653