Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0267 | ATGGAGCGGAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGGAAGCACAGGAATGCAGTTAATAAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAGCAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTCATCCAGATATGCAGAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCCGCTATGATTACACTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGGTAA | 786 | 41.86 | MERNYPYENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAEQKNESSGTLSNFTGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAIGSNLGSIGSTGMQLINFDAALSDQIEKFKKQEMRGGIADVNGVCKKTNDSLIQICRVEAGEEATINEFNVEKNMINFDLNSKGRYDYTANAAEILDAKVLPCSR | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2622870 | 2626222 | + | CePI673135_07g002670.1 | Cec07g0267 | 207046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0267 | 261 | Pfam | Myb-like DNA-binding domain | 20 | 71 | IPR001005 | - | |
Cec07g0267 | 261 | Gene3D | - | 17 | 74 | - | - | |
Cec07g0267 | 261 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 18 | 72 | IPR006447 | GO:0003677(InterPro) | |
Cec07g0267 | 261 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - | |
Cec07g0267 | 261 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 240 | IPR046955 | GO:0003700(InterPro) | |
Cec07g0267 | 261 | FunFam | Myb family transcription factor | 17 | 75 | - | - | |
Cec07g0267 | 261 | Pfam | MYB-CC type transfactor, LHEQLE motif | 105 | 151 | IPR025756 | - | |
Cec07g0267 | 261 | SUPERFAMILY | Homeodomain-like | 18 | 75 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0267 | Cec-Chr7:2622870 | Cec09g2389 | Cec-Chr9:40654358 | 7.20E-31 | dispersed | |
Cec07g0267 | Cec-Chr7:2622870 | Cec02g1969 | Cec-Chr2:37533770 | 2.20E-32 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29874 | PF00249 | Myb_DNA-binding | 2.70E-07 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0267 | - | - | - | 0.0 |