Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0276 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAAGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAACCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCGAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATATTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAATTCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATTTGCCAATGCTAGTGGGGAACTTGTCTCCAATAGAATGGCACCCACTGTTAAAGTGATTCCTCCACCACCACCGCCACCACCTTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCTCCACCTTTGCCTCCACCTCCAATTCCAAAATCTTCTAGTGCTCCCCCGCCTCTGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCCGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTCTAGTGCTCCTCCACCTCTGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTTCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCCTCCACCTCCACCTCCGCCACCGCCTCCGCCTCCGCTTCTAAAATCATCTAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTCCTCCACCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAACTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCAAGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACTACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTTCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGACGGTGCCATCTCTGTTGGTTTCCTGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAACGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCAGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGAGGTTCGAGTGTTCTGTTGATCTCAACTTGACATTGTCATTATGGTAA 4011 44.1 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLEPEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTIPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPFANASGELVSNRMAPTVKVIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPLPPPPIPKSSSAPPPLPLVPKSFGAPPPPPPPPPVVPKSFGAPPPPPPPPPPPIVPKSSSAPPPLPPPPVSKSSNAPPPSPPPPFLKSSNAPPPPPPPPPPPPLLKSSSAPPPPPPPPPPKSSSALPPPPPKSSSALPPPPPPPPPPSIPKLSGAPPPPPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSTRPPPPPPPAKPFNAHPPTSQGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFLKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKLNMRQFCSQRFECSVDLNLTLSLW 1336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2713591 2724271 + CePI673135_07g002760.1 Cec07g0276 207055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0276 1336 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cec07g0276 1336 Pfam Formin Homology 2 Domain 896 1266 IPR015425 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 578 592 - -
Cec07g0276 1336 Gene3D - 197 342 - -
Cec07g0276 1336 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 945 964 - -
Cec07g0276 1336 FunFam Formin-like protein 890 1277 - -
Cec07g0276 1336 Coils Coil 1172 1199 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 560 574 - -
Cec07g0276 1336 Gene3D Formin, FH2 domain 893 1277 IPR042201 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 593 609 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 489 520 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 543 558 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 610 818 - -
Cec07g0276 1336 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Cec07g0276 1336 SUPERFAMILY Formin homology 2 domain (FH2 domain) 904 1284 - -
Cec07g0276 1336 SMART it6_source 542 1330 IPR015425 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 406 431 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 825 873 - -
Cec07g0276 1336 PANTHER FORMIN-J 793 1289 IPR051144 -
Cec07g0276 1336 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Cec07g0276 1336 ProSiteProfiles Formin homology-2 (FH2) domain profile. 891 1291 IPR015425 -
Cec07g0276 1336 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cec07g0276 1336 SMART PTEN_C2_2 198 338 IPR014020 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 542 896 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1416 Cec-Chr6:27698588 Cec07g0276 Cec-Chr7:2713591 4.10E-252 dispersed
Cec06g1796 Cec-Chr6:31425987 Cec07g0276 Cec-Chr7:2713591 3.30E-206 dispersed
Cec07g0276 Cec-Chr7:2713591 Cec05g1807 Cec-Chr5:29912873 6.90E-263 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0276 K28090 - csv:101217517 1063.52