Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0276 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAAGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAACCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCGAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATATTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAATTCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATTTGCCAATGCTAGTGGGGAACTTGTCTCCAATAGAATGGCACCCACTGTTAAAGTGATTCCTCCACCACCACCGCCACCACCTTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCTCCACCTTTGCCTCCACCTCCAATTCCAAAATCTTCTAGTGCTCCCCCGCCTCTGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCCGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTCTAGTGCTCCTCCACCTCTGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTTCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCCTCCACCTCCACCTCCGCCACCGCCTCCGCCTCCGCTTCTAAAATCATCTAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTCCTCCACCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAACTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCAAGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACTACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTTCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGACGGTGCCATCTCTGTTGGTTTCCTGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAACGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCAGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGAGGTTCGAGTGTTCTGTTGATCTCAACTTGACATTGTCATTATGGTAA 4011 44.1 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLEPEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTIPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPFANASGELVSNRMAPTVKVIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPLPPPPIPKSSSAPPPLPLVPKSFGAPPPPPPPPPVVPKSFGAPPPPPPPPPPPIVPKSSSAPPPLPPPPVSKSSNAPPPSPPPPFLKSSNAPPPPPPPPPPPPLLKSSSAPPPPPPPPPPKSSSALPPPPPKSSSALPPPPPPPPPPSIPKLSGAPPPPPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSTRPPPPPPPAKPFNAHPPTSQGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFLKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKLNMRQFCSQRFECSVDLNLTLSLW 1336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2713591 2724271 + CePI673135_07g002760.1 Cec07g0276 207055

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0276 1336 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cec07g0276 1336 Pfam Formin Homology 2 Domain 896 1266 IPR015425 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 578 592 - -
Cec07g0276 1336 Gene3D - 197 342 - -
Cec07g0276 1336 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 945 964 - -
Cec07g0276 1336 FunFam Formin-like protein 890 1277 - -
Cec07g0276 1336 Coils Coil 1172 1199 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 560 574 - -
Cec07g0276 1336 Gene3D Formin, FH2 domain 893 1277 IPR042201 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 593 609 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 489 520 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 543 558 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 610 818 - -
Cec07g0276 1336 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Cec07g0276 1336 SUPERFAMILY Formin homology 2 domain (FH2 domain) 904 1284 - -
Cec07g0276 1336 SMART it6_source 542 1330 IPR015425 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 406 431 - -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 825 873 - -
Cec07g0276 1336 PANTHER FORMIN-J 793 1289 IPR051144 -
Cec07g0276 1336 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Cec07g0276 1336 ProSiteProfiles Formin homology-2 (FH2) domain profile. 891 1291 IPR015425 -
Cec07g0276 1336 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cec07g0276 1336 SMART PTEN_C2_2 198 338 IPR014020 -
Cec07g0276 1336 MobiDBLite consensus disorder prediction 542 896 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0276 K28090 - - csv:101217517 1063.52
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1416 Cec-Chr6:27698588 Cec07g0276 Cec-Chr7:2713591 4.10E-252 dispersed
Cec06g1796 Cec-Chr6:31425987 Cec07g0276 Cec-Chr7:2713591 3.30E-206 dispersed
Cec07g0276 Cec-Chr7:2713591 Cec05g1807 Cec-Chr5:29912873 6.90E-263 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec07g0284 . 181 1049 FH2 protein (formin) Gene Family AT3G25500 52.5 3.1e-194 676.0
Cec11g0101 . 464 940 FH2 protein (formin) Gene Family AT3G25500 67.1 1.1e-165 581.3
Cec02g1278 . 432 888 FH2 protein (formin) Gene Family AT3G25500 59.9 3.1e-141 500.0
Cec03g1767 . 495 892 FH2 protein (formin) Gene Family AT3G25500 51.5 2.6e-103 374.0
Cec07g0284 . 612 1071 FH2 protein (formin) Gene Family AT2G43800 60.4 4.1e-142 502.7
Cec02g1278 . 466 904 FH2 protein (formin) Gene Family AT2G43800 55.1 9.1e-126 448.4
Cec02g0866 . 489 626 FH2 protein (formin) Gene Family AT4G15200 71.4 2.6e-47 186.8
Cec05g1657 . 569 715 FH2 protein (formin) Gene Family AT4G15200 66.7 3.4e-47 186.4
Cec05g1657 . 570 1006 FH2 protein (formin) Gene Family AT5G54650 69.2 3.3e-168 589.3
Cec02g0866 . 492 947 FH2 protein (formin) Gene Family AT5G54650 63.3 6.9e-158 555.1
Cec07g0284 . 623 1024 FH2 protein (formin) Gene Family AT5G54650 50.8 2.2e-103 374.0
Cec02g1278 . 31 907 FH2 protein (formin) Gene Family AT5G67470 58.4 2.7e-239 825.5
Cec07g0284 . 604 1066 FH2 protein (formin) Gene Family AT5G67470 58.5 8.2e-135 478.4
Cec11g0101 . 477 922 FH2 protein (formin) Gene Family AT5G67470 60.9 1.7e-132 470.7
Cec03g1767 . 495 894 FH2 protein (formin) Gene Family AT5G67470 50.6 1.3e-103 374.8
Cec05g2724 . 346 832 FH2 protein (formin) Gene Family AT1G59910 52.1 6.5e-127 452.2
Cec07g0284 . 644 1025 FH2 protein (formin) Gene Family AT5G48360 52.6 3.0e-101 366.7
Cec02g1278 . 490 865 FH2 protein (formin) Gene Family AT5G48360 50.3 5.9e-89 325.9
Cec02g1278 . 470 864 FH2 protein (formin) Gene Family AT3G05470 52.2 1.6e-106 384.4
Cec05g1657 . 575 989 FH2 protein (formin) Gene Family AT3G05470 50.6 4.6e-106 382.9
Cec07g0276 . 977 1288 FH2 protein (formin) Gene Family AT1G42980 51.1 4.5e-69 258.5
Cec07g0276 . 1 1295 FH2 protein (formin) Gene Family AT1G31810 64.4 0.0e+00 1220.7
Cec06g1416 . 1 1245 FH2 protein (formin) Gene Family AT1G31810 50.4 1.3e-239 827.0
Cec06g1796 . 1337 1658 FH2 protein (formin) Gene Family AT5G07650 75.2 7.0e-130 461.8
Cec01g1748 . 974 1284 FH2 protein (formin) Gene Family AT5G07650 70.1 5.6e-119 425.6
Cec05g1807 . 1040 1362 FH2 protein (formin) Gene Family AT5G07650 65.0 3.6e-110 396.4
Cec06g1416 . 935 1254 FH2 protein (formin) Gene Family AT5G07650 62.9 1.1e-109 394.8
Cec07g0276 . 961 1292 FH2 protein (formin) Gene Family AT5G07650 59.6 9.9e-108 388.3
Cec06g1796 . 1264 1651 FH2 protein (formin) Gene Family AT5G07770 69.4 6.6e-141 498.0
Cec01g1748 . 897 1284 FH2 protein (formin) Gene Family AT5G07770 63.2 6.4e-128 454.9
Cec05g1807 . 964 1354 FH2 protein (formin) Gene Family AT5G07770 59.4 9.2e-119 424.5
Cec06g1416 . 858 1246 FH2 protein (formin) Gene Family AT5G07770 57.3 4.3e-116 415.6
Cec07g0276 . 897 1286 FH2 protein (formin) Gene Family AT5G07770 55.2 8.1e-115 411.4
Cec05g1807 . 956 1362 FH2 protein (formin) Gene Family AT3G32400 75.9 9.7e-170 593.6
Cec06g1416 . 865 1255 FH2 protein (formin) Gene Family AT3G32400 69.2 2.7e-148 522.3
Cec06g1796 . 1264 1658 FH2 protein (formin) Gene Family AT3G32400 65.0 2.5e-141 499.2
Cec07g0276 . 897 1291 FH2 protein (formin) Gene Family AT3G32400 65.5 2.7e-140 495.7
Cec01g1748 . 867 1287 FH2 protein (formin) Gene Family AT3G32400 58.3 8.0e-132 467.6
Cec05g1807 . 1 1362 FH2 protein (formin) Gene Family AT2G25050 53.9 0.0e+00 1175.6
Cec06g1416 . 1 1255 FH2 protein (formin) Gene Family AT2G25050 54.0 8.9e-291 996.9
Cec06g1796 . 1265 1658 FH2 protein (formin) Gene Family AT5G07780 63.0 1.7e-123 439.9
Cec01g1748 . 898 1287 FH2 protein (formin) Gene Family AT5G07780 57.9 1.0e-112 404.1
Cec05g1807 . 965 1355 FH2 protein (formin) Gene Family AT5G07780 54.3 2.5e-103 372.9
Cec06g1416 . 865 1254 FH2 protein (formin) Gene Family AT5G07780 53.8 1.8e-101 366.7
Cec07g0276 . 898 1287 FH2 protein (formin) Gene Family AT5G07780 52.0 2.4e-101 366.3
Cec06g1796 . 1 1667 FH2 protein (formin) Gene Family AT5G07740 62.7 0.0e+00 1128.2
Cec06g1796 . 1336 1665 FH2 protein (formin) Gene Family AT5G07760 74.7 1.5e-128 457.6
Cec01g1748 . 973 1287 FH2 protein (formin) Gene Family AT5G07760 69.3 1.3e-116 417.9
Cec06g1416 . 934 1254 FH2 protein (formin) Gene Family AT5G07760 64.7 5.2e-110 396.0
Cec05g1807 . 1039 1371 FH2 protein (formin) Gene Family AT5G07760 63.7 3.4e-109 393.3
Cec07g0276 . 971 1292 FH2 protein (formin) Gene Family AT5G07760 60.1 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010762 0 1 1 0 0 1 2 1 1 1 1 1 2 1 1 1 1 2 2 1 1 1 1 1 1 0 1 1 3 1 32