Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0286 ATGACTCTATTTTCATTCTCATTCTTGTTCGTAGTACTTCTTCAGTTATCTATTCTGTTAAATAGTCTGACTGCCAAAAACGGCGACCACCACCACCACCACCACCATGTCCGATCACCAGGACTGAACCCGAACCCGAACCCGAGACTCCATCAAGCATTCCTTGCTCTCCAAGCATGGAAAAAAGTCATTTACTCGGACCCAAAAAACCACACTACCAATTGGGTGGGGCCATCAGTTTGCAACTACTTTGGAGTGTATTGTGCCCCATCTCTTGATGACCCAAAAATCCAAGTGGTCGCCGGAATTGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTAACGAATTGGGCCTTTTAACAGATCTTGCTCTGCTTCATCTCAACAGCAACCGATTCTGTGGCATTTTGCCACAATCTTTAGCCAATTTATCTCTTCTCTTTGAATTAGATTTAAGCAACAACAGATTCGTAGGCCCTTTTCCTTCTGTTGTTCTTCTCCTTCCAAAATTAACATATCTTGATCTTCGATTCAACGAATTTGAAGGCCCAATTCCCTCTGAACTCTTCAACAAAACCCTCGACGCCATTTTTATCAACAGCAATCGTTTCACCAACATTATCCCACGAAACATCGGTGGAAAATCAGCCTCTGTGATTGTCTTTGCTAACAACAATTTAAAGGGTTGTCTTCCACCCACAATTGCAAGTTTTGCAAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGTTTATCTGGCTGTTTGCCACAAGAAATTGGGTTTTTGTATAAATTGAAGGTTTTGGATGTGAGTTTTAACAAATTAATGGGTCCTTTGCCTTATAGTTTAGCTGGGTTAGCTCAATTGGAGCAATTGAATTTAGCCCATAACTTGTTTAGTGGGAATTTGTATGAAGGTATCTGTAGCCTTCCGAATTTGGAGAATGTGACAGTTTCTTATAATTACTTTTGTGAAGAAGAAGGGATTTGCCGGAATTTGACGGCGAAAGGGATCGCTTTTGATGATCGGCGGAATTGCTTGCCGGAGAAGCCGTTGCAGAGGAGTAAAAAGGAGTGTAGTGCGGTGGTTGAGCGTCCTGTGGACTGTTTTGAGCATCCGTGCGGCGGCGGCGGAGGTAATGGTTCTAGTATTGTGGCGGTTCCGGCTCCGACGCCAATTTCTTCACCTTCTTCCTTTGTTGCCCCTTCCCACTTGTGA 1224 43.71 MTLFSFSFLFVVLLQLSILLNSLTAKNGDHHHHHHHVRSPGLNPNPNPRLHQAFLALQAWKKVIYSDPKNHTTNWVGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPNELGLLTDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLLLPKLTYLDLRFNEFEGPIPSELFNKTLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLMGPLPYSLAGLAQLEQLNLAHNLFSGNLYEGICSLPNLENVTVSYNYFCEEEGICRNLTAKGIAFDDRRNCLPEKPLQRSKKECSAVVERPVDCFEHPCGGGGGNGSSIVAVPAPTPISSPSSFVAPSHL 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2825988 2827211 - CePI673135_07g002860.1 Cec07g0286 207065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0286 407 Pfam Leucine Rich Repeat 126 145 IPR001611 GO:0005515(InterPro)
Cec07g0286 407 Pfam Leucine Rich Repeat 290 312 IPR001611 GO:0005515(InterPro)
Cec07g0286 407 Pfam Leucine Rich Repeat 266 288 IPR001611 GO:0005515(InterPro)
Cec07g0286 407 Pfam Leucine Rich Repeat 171 192 IPR001611 GO:0005515(InterPro)
Cec07g0286 407 Pfam Leucine Rich Repeat 148 164 IPR001611 GO:0005515(InterPro)
Cec07g0286 407 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 393 IPR051582 -
Cec07g0286 407 SUPERFAMILY L domain-like 53 327 - -
Cec07g0286 407 Gene3D Ribonuclease Inhibitor 218 341 IPR032675 -
Cec07g0286 407 Gene3D Ribonuclease Inhibitor 53 217 IPR032675 -
Cec07g0286 407 FunFam Leucine-rich repeat extensin-like protein 1 54 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0578 Cec-Chr5:4728538 Cec07g0286 Cec-Chr7:2825988 3.90E-46 dispersed
Cec07g0286 Cec-Chr7:2825988 Cec11g0262 Cec-Chr11:2811538 8.00E-29 dispersed
Cec07g0286 Cec-Chr7:2825988 Cec06g1179 Cec-Chr6:23995130 9.10E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0286 - - - 0.0