Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0293 ATGAGCAGCGTTTGTGCGGAGCAACAGAAATTTCAATTTCAATTTCAATTCCCGTCTTCTGCTTCTGCTGCTTCTTCTTCTTGTTCTTCGTGGTTTCTTAAGGATATTAACGTTCCGCCGAGGAAGCTTGTTGCTGCGGTGAGACGAGAAAACGGTGAAATGTGTTCTGATTCCCCGCGGTTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTCAATGGCGAGGATGAAGCGGAGGAGGATGGAGATCCGTATTCCTCAGATCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCAGGAGAGAAGGCACGGAGGCGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGAGTTTCGTCGCGGCGGTTGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAATGTTGGCTTCATCCCGCGAGGTATCGTACTGAAGCTTGTAAAGATGGAAAAAATTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCTCCTGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCACCGAATAAGAGAAATTCTGGTCTTAGATCGGCCACTTCCGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACTTCCTCACCGACTTCAACGCTTTTCGGAATGTCTCATCTGTCTCCGCCACACTCTCCGCCGCTCTCGCCGGGAAAACCTCGGTCATCGATTAATGGATTTTCACCGATTTCGAGGTACAATCCTGATCAGTCTAAGTTAAATGGAGTTTTGAGCTATAAAGATGCACTGACTGAGCTGATGAGCTCAATTGAATCCATGAATATCGACGACGCCAATGCCACTTTAGCCGCCGCCGCCGCCGCCACTCCAAGACAGACGATTCCTTGGATCGATGTTTCATCTCTCAACTCTGAAGATCAACTGCAGTTTGTTCTCTCACCTTCTACTCCAAACGCGTCCGTCGAGAACAAAGGTAACCCCGACAATGGATGGGCCTCCTCCGATCCGGATCTTGGATGGGTTAATGATCTGCTGATGTAA 1134 48.32 MSSVCAEQQKFQFQFQFPSSASAASSSCSSWFLKDINVPPRKLVAAVRRENGEMCSDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRNSGLRSATSGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGKPRSSINGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMNIDDANATLAAAAAATPRQTIPWIDVSSLNSEDQLQFVLSPSTPNASVENKGNPDNGWASSDPDLGWVNDLLM 377
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 2865718 2866851 + CePI673135_07g002930.1 Cec07g0293 207072
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0293 377 MobiDBLite consensus disorder prediction 262 277 - -
Cec07g0293 377 FunFam Zinc finger CCCH domain-containing protein 66 90 158 - -
Cec07g0293 377 MobiDBLite consensus disorder prediction 346 366 - -
Cec07g0293 377 ProSiteProfiles Zinc finger C3H1-type profile. 133 159 IPR000571 GO:0046872(InterPro)
Cec07g0293 377 Gene3D - 132 195 - -
Cec07g0293 377 SMART c3hfinal6 132 158 IPR000571 GO:0046872(InterPro)
Cec07g0293 377 SMART c3hfinal6 167 190 IPR000571 GO:0046872(InterPro)
Cec07g0293 377 MobiDBLite consensus disorder prediction 346 361 - -
Cec07g0293 377 PANTHER UNKEMPT FAMILY MEMBER 59 328 IPR045234 -
Cec07g0293 377 MobiDBLite consensus disorder prediction 247 277 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0293 Cec-Chr7:2865718 Cec11g0201 Cec-Chr11:2165280 3.80E-57 dispersed
Cec07g0293 Cec-Chr7:2865718 Cec05g1948 Cec-Chr5:31562905 1.70E-57 transposed
Cec07g0293 Cec-Chr7:2865718 Cec03g1649 Cec-Chr3:34662962 1.70E-57 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29877 None None None None Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0293 K23047 - csv:101211149 597.816