Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec07g0293 | ATGAGCAGCGTTTGTGCGGAGCAACAGAAATTTCAATTTCAATTTCAATTCCCGTCTTCTGCTTCTGCTGCTTCTTCTTCTTGTTCTTCGTGGTTTCTTAAGGATATTAACGTTCCGCCGAGGAAGCTTGTTGCTGCGGTGAGACGAGAAAACGGTGAAATGTGTTCTGATTCCCCGCGGTTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTCAATGGCGAGGATGAAGCGGAGGAGGATGGAGATCCGTATTCCTCAGATCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCAGGAGAGAAGGCACGGAGGCGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGAGTTTCGTCGCGGCGGTTGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAATGTTGGCTTCATCCCGCGAGGTATCGTACTGAAGCTTGTAAAGATGGAAAAAATTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCTCCTGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCACCGAATAAGAGAAATTCTGGTCTTAGATCGGCCACTTCCGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACTTCCTCACCGACTTCAACGCTTTTCGGAATGTCTCATCTGTCTCCGCCACACTCTCCGCCGCTCTCGCCGGGAAAACCTCGGTCATCGATTAATGGATTTTCACCGATTTCGAGGTACAATCCTGATCAGTCTAAGTTAAATGGAGTTTTGAGCTATAAAGATGCACTGACTGAGCTGATGAGCTCAATTGAATCCATGAATATCGACGACGCCAATGCCACTTTAGCCGCCGCCGCCGCCGCCACTCCAAGACAGACGATTCCTTGGATCGATGTTTCATCTCTCAACTCTGAAGATCAACTGCAGTTTGTTCTCTCACCTTCTACTCCAAACGCGTCCGTCGAGAACAAAGGTAACCCCGACAATGGATGGGCCTCCTCCGATCCGGATCTTGGATGGGTTAATGATCTGCTGATGTAA | 1134 | 48.32 | MSSVCAEQQKFQFQFQFPSSASAASSSCSSWFLKDINVPPRKLVAAVRRENGEMCSDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRNSGLRSATSGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGKPRSSINGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMNIDDANATLAAAAAATPRQTIPWIDVSSLNSEDQLQFVLSPSTPNASVENKGNPDNGWASSDPDLGWVNDLLM | 377 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2865718 | 2866851 | + | CePI673135_07g002930.1 | Cec07g0293 | 207072 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec07g0293 | 377 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
| Cec07g0293 | 377 | FunFam | Zinc finger CCCH domain-containing protein 66 | 90 | 158 | - | - | |
| Cec07g0293 | 377 | MobiDBLite | consensus disorder prediction | 346 | 366 | - | - | |
| Cec07g0293 | 377 | ProSiteProfiles | Zinc finger C3H1-type profile. | 133 | 159 | IPR000571 | GO:0046872(InterPro) | |
| Cec07g0293 | 377 | Gene3D | - | 132 | 195 | - | - | |
| Cec07g0293 | 377 | SMART | c3hfinal6 | 132 | 158 | IPR000571 | GO:0046872(InterPro) | |
| Cec07g0293 | 377 | SMART | c3hfinal6 | 167 | 190 | IPR000571 | GO:0046872(InterPro) | |
| Cec07g0293 | 377 | MobiDBLite | consensus disorder prediction | 346 | 361 | - | - | |
| Cec07g0293 | 377 | PANTHER | UNKEMPT FAMILY MEMBER | 59 | 328 | IPR045234 | - | |
| Cec07g0293 | 377 | MobiDBLite | consensus disorder prediction | 247 | 277 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec07g0293 | Cec-Chr7:2865718 | Cec11g0201 | Cec-Chr11:2165280 | 3.80E-57 | dispersed | |
| Cec07g0293 | Cec-Chr7:2865718 | Cec05g1948 | Cec-Chr5:31562905 | 1.70E-57 | transposed | |
| Cec07g0293 | Cec-Chr7:2865718 | Cec03g1649 | Cec-Chr3:34662962 | 1.70E-57 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 29877 | None | None | None | None | Cec | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec07g0293 | K23047 | - | csv:101211149 | 597.816 |