Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0309 ATGGCGTCCATTATTATTTCTCATCTTTTCATTGCTTTTTCCCTTTTAGCCTTCTCAGCCAATGCTCAGCTCTCATCCAGCTTCTACTCAAAAAGCTGTCCCAGACTCCAATCAATTGTTCGTGATGGTATGACCAAAGCTGTTAACAAAGAAAAGCGTGTGGGAGCTTCCATCCTTCGCTTGTTCTTCCACGACTGCTTCGTAAATGGTTGCGATGGTTCTATCTTGTTGGATGATACTTCAACATTTACGGGTGAAAAAAATGCATTTCCAAATAGAAACTCAGCTAGAGGTTTCGAAGTAATTGATGACATTAAAACTCAAGTTGAAGCTGCTTGCAATGCCACCGTTTCTTGTGCTGATATTCTTGCTCTTGCCACTCGTGATGGAGTCGTTCTGCTCGGAGGGCCAAATTGGGTTGTACCACTCGGTCGAAGGGACTCAAGGACAGCAAGCGAGAGCGGAGCGAACAGCAACCTTCCGGGACCAGCCTCTGACCTGTCGACACTCATCTCACTATTTGCCGCTCAAGGCCTCAACGCCCGCGACATGACAGCCCTCTCGGGCGCTCACACCATAGGCAATGGCCAATGTCGTTTCTTTCGAACTCGCATCTACAACGAAACCAACATTGATCCCACCTTTGCCACCCAGCGGCAAGAAAACTGTCCGTTCAGCGGCGGCGACTCGAACTTGGCCCCTCTTGACTCAACCAACACTTTTTTTGACAACAGATATTACGTAGACCTAACTAATAAGCGTGGCCTGTTTCATTCGGACCAACAACTCTTCAACGGCGGTTCACAAGATGCGTTGGTTCAGACCTACAGTAAAAGTCCTACTGCCTTTAAATCGGATTTTGTAAATGCGATGATCAAGATGGGGAATCTCCGTCCAGCGAGTGGAACCCCCACTGAGATTAGAAAAAATTGTAGGGTGGTTAATTAA 948 47.05 MASIIISHLFIAFSLLAFSANAQLSSSFYSKSCPRLQSIVRDGMTKAVNKEKRVGASILRLFFHDCFVNGCDGSILLDDTSTFTGEKNAFPNRNSARGFEVIDDIKTQVEAACNATVSCADILALATRDGVVLLGGPNWVVPLGRRDSRTASESGANSNLPGPASDLSTLISLFAAQGLNARDMTALSGAHTIGNGQCRFFRTRIYNETNIDPTFATQRQENCPFSGGDSNLAPLDSTNTFFDNRYYVDLTNKRGLFHSDQQLFNGGSQDALVQTYSKSPTAFKSDFVNAMIKMGNLRPASGTPTEIRKNCRVVN 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3014399 3016214 - CePI673135_07g003090.1 Cec07g0309 207088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0309 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 Pfam Peroxidase 40 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cec07g0309 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 CDD secretory_peroxidase 23 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec07g0309 315 ProSiteProfiles Plant heme peroxidase family profile. 23 315 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 PANTHER PEROXIDASE 72-RELATED 14 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 FunFam Peroxidase 161 294 - -
Cec07g0309 315 FunFam Peroxidase 27 167 - -
Cec07g0309 315 SUPERFAMILY Heme-dependent peroxidases 23 315 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec07g0309 315 Gene3D - 28 312 - -
Cec07g0309 315 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cec07g0309 315 Gene3D Peroxidase, domain 2 161 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2011 Cec-Chr2:37947159 Cec07g0309 Cec-Chr7:3014399 7.80E-96 dispersed
Cec07g0309 Cec-Chr7:3014399 Cec11g0607 Cec-Chr11:6671703 7.90E-101 dispersed
Cec11g0735 Cec-Chr11:8320099 Cec07g0309 Cec-Chr7:3014399 3.20E-52 dispersed
Cec07g0309 Cec-Chr7:3014399 Cec07g0954 Cec-Chr7:23438909 1.40E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0309 K00430 - csv:101208932 549.28