Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0310 ATGGAACTTGAAGACGACTACCGAAGAAAGCAGCAACTCCTTCTTCTGGTAATCGTTGTACTTGCTTCTCTCGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCCAAGCGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTTGTTTTGAAAATGGTAAAGAATTTTCCACTGAGAAAGGTCTCCAATTGTTCACCTTCAAGCAGCTACACTCCGCAACAGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGGCATGTATATCGGGGAGTCCTGAACGATGGGAGAAAGGTTGCGGTTAAGCTTATGGATCAAGCAGGGAAGCAGGGAGAGGACGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGCCTTCATTCACCATATTTGTTGGCATTGCTTGGGTATTGCTCAGATAACAATCATAAATTACTCGTATATGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTATACCCTATTAGCAGTTCAAATTCAATCAGCGTTAAGTTGGACTGGGAAACACGACTGAGAGTTGCCCTCGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTATGTCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTCCTGCTGGACAAAAACCTTCATGCTAAGGTTTCTGATTTTGGATTGGCAAAGATCGGCTCAGACAAAGCCGGGGGTCACGTCTCCACTCGAGTTTTAGGGACACAAGGATATGTTGCCCCTGAGTATGCGCTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTGGTCCTCTTGGAGCTGCTCACTGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAAGATGTTGTTCAAGTGGCAGCAATTGCAGCAATGTGTGTTCAACCGGAGGCGGATTATAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCGATTGTGAGAAATTACCGGACTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCACCTGCAGCGCATGACAATGCTAGTTCAGGAGACTGA 1197 46.45 MELEDDYRRKQQLLLLVIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGCFENGKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAVKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPISSSNSISVKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPIVRNYRTSKIGSSSSSSATKSPAAHDNASSGD 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3031882 3034871 - CePI673135_07g003100.1 Cec07g0310 207089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0310 398 SUPERFAMILY Protein kinase-like (PK-like) 67 364 IPR011009 -
Cec07g0310 398 PANTHER OS01G0750732 PROTEIN 20 389 IPR050885 -
Cec07g0310 398 FunFam Serine/threonine-protein kinase PBS1 57 163 - -
Cec07g0310 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0310 398 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0310 398 CDD STKc_IRAK 94 367 - -
Cec07g0310 398 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524(InterPro)
Cec07g0310 398 Gene3D Transferase(Phosphotransferase) domain 1 164 387 - -
Cec07g0310 398 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0310 398 MobiDBLite consensus disorder prediction 375 398 - -
Cec07g0310 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 164 384 - -
Cec07g0310 398 Gene3D Phosphorylase Kinase; domain 1 59 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1742 Cec-Chr3:35726938 Cec07g0310 Cec-Chr7:3031882 8.50E-114 dispersed
Cec07g0310 Cec-Chr7:3031882 Cec10g1162 Cec-Chr10:25380428 3.10E-86 dispersed
Cec07g1687 Cec-Chr7:32466506 Cec07g0310 Cec-Chr7:3031882 7.50E-67 dispersed
Cec09g0332 Cec-Chr9:2767893 Cec07g0310 Cec-Chr7:3031882 1.00E-39 dispersed
Cec10g1219 Cec-Chr10:26298637 Cec07g0310 Cec-Chr7:3031882 8.30E-51 transposed
Cec03g0643 Cec-Chr3:7000220 Cec07g0310 Cec-Chr7:3031882 7.70E-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72119 PF07714 PK_Tyr_Ser-Thr 6.80E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0310 - - - 0.0