Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0386 ATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCATCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTTCCCCTTTCTTTAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACCTATGGCTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGTGGTCGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCAACCAAAGTTTTGATAACGTCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATTTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGA 663 42.68 MTGLNSSNFSSSSCGACKFLRRKCSDQCVFSPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAVVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPNQSFDNVQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVERSACDFSFEESFVGYPWVVG 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3946450 3947379 + CePI673135_07g003860.1 Cec07g0386 207165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0386 220 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Cec07g0386 220 Pfam Lateral organ boundaries (LOB) domain 13 109 IPR004883 -
Cec07g0386 220 Coils Coil 93 120 - -
Cec07g0386 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 136 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0386 Cec-Chr7:3946450 Cec09g0783 Cec-Chr9:7182849 5.50E-32 dispersed
Cec07g0386 Cec-Chr7:3946450 Cec06g0038 Cec-Chr6:382522 2.40E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29885 PF03195 LOB 2.40E-32 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0386 K13945 - csv:101204875 369.777