Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0386 | ATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCATCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTTCCCCTTTCTTTAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACCTATGGCTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGTGGTCGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCAACCAAAGTTTTGATAACGTCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATTTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGA | 663 | 42.68 | MTGLNSSNFSSSSCGACKFLRRKCSDQCVFSPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAVVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPNQSFDNVQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVERSACDFSFEESFVGYPWVVG | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3946450 | 3947379 | + | CePI673135_07g003860.1 | Cec07g0386 | 207165 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0386 | 220 | ProSiteProfiles | LOB domain profile. | 12 | 114 | IPR004883 | - | |
Cec07g0386 | 220 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 109 | IPR004883 | - | |
Cec07g0386 | 220 | Coils | Coil | 93 | 120 | - | - | |
Cec07g0386 | 220 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 11 | 136 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0386 | Cec-Chr7:3946450 | Cec09g0783 | Cec-Chr9:7182849 | 5.50E-32 | dispersed | |
Cec07g0386 | Cec-Chr7:3946450 | Cec06g0038 | Cec-Chr6:382522 | 2.40E-35 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29885 | PF03195 | LOB | 2.40E-32 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0386 | K13945 | - | csv:101204875 | 369.777 |