Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0387 ATGGCGAATCGATGGTGGGCTGAAAATATACCCACCACCACGGACAGCAGCACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCGGGAAGCCATGAGAGAGCTGAACCAGGCACCAGTTCAAGCACGCGCCGCCCTCGTGGCCGGCCGCCGGGATCTAAGAACAAGCCGAAGCCACCGGTGGTTGTAACGAAGGAGAGCCCCGATGCCCTCCGGAGCCACGTTTTGGAAATAGGCAGCGGCAGTGACATCGTTGAAAGCATCTCGAACTTCGCCCAGCGCCGGCAGCGAGGAGTTTCAGTTCTTAGCGGAAATGGGGTTGTCGCCAATGTAACTCTCCGGCATCCGGTGGCCCCAGGCGGCGTTATTACACTACAAGGTCGATTTGATATACTGTCGCTCTCTGGTGCTTTTTTGCCTGCCCCAGCTCCGCCGGGTGCAACTGGGTTAACTGTCTACTTGGCTGGCGGACAGGGGCAGGTCGTTGGTGGCATTGTTGTCGGTGCACTCGTTGCAACCGGTCCAGTCATCGTCATTGCTGCCACTTTCACCAATGCAACATTCGAGCGGCTGCCGCTCGAGGATGAGGAGGTGGCCGCGGGAGACAAGTCTGGGACTAGCCAGAACAATTCAACTTCTCAGAGCATGGGGGAGCAACAGCAACAGCAACAGCAGCAACAACAGCAACAGCAGCCTTCAATGGGAGTTTACAATATGGGTCCAAACTTGGTGCCAAATGGTCAGGTTTCTTCACATGATGTGTTTTGGAGTCCTCCTAGAGCCCCACCTCCATTTTAA 828 55.07 MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSHERAEPGTSSSTRRPRGRPPGSKNKPKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPVAPGGVITLQGRFDILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGALVATGPVIVIAATFTNATFERLPLEDEEVAAGDKSGTSQNNSTSQSMGEQQQQQQQQQQQQQPSMGVYNMGPNLVPNGQVSSHDVFWSPPRAPPPF 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3952144 3952971 - CePI673135_07g003870.1 Cec07g0387 207166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0387 275 CDD DUF296 82 165 IPR005175 -
Cec07g0387 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 194 IPR005175 -
Cec07g0387 275 MobiDBLite consensus disorder prediction 212 263 - -
Cec07g0387 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 272 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec07g0387 275 MobiDBLite consensus disorder prediction 1 78 - -
Cec07g0387 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 208 - -
Cec07g0387 275 MobiDBLite consensus disorder prediction 43 58 - -
Cec07g0387 275 PIRSF ESCAROLA 7 273 IPR014476 GO:0003680(InterPro)
Cec07g0387 275 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Cec07g0387 275 FunFam AT-hook motif nuclear-localized protein 81 208 - -
Cec07g0387 275 MobiDBLite consensus disorder prediction 1 35 - -
Cec07g0387 275 Gene3D - 81 210 - -
Cec07g0387 275 MobiDBLite consensus disorder prediction 207 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1771 Cec-Chr2:35542995 Cec07g0387 Cec-Chr7:3952144 4.00E-70 dispersed
Cec05g0521 Cec-Chr5:4157903 Cec07g0387 Cec-Chr7:3952144 2.00E-64 dispersed
Cec06g0693 Cec-Chr6:7862803 Cec07g0387 Cec-Chr7:3952144 3.00E-53 dispersed
Cec06g1643 Cec-Chr6:30034982 Cec07g0387 Cec-Chr7:3952144 1.10E-58 dispersed
Cec07g0387 Cec-Chr7:3952144 Cec09g1211 Cec-Chr9:12651514 7.20E-58 dispersed
Cec03g1314 Cec-Chr3:29417900 Cec07g0387 Cec-Chr7:3952144 1.80E-37 transposed
Cec11g0696 Cec-Chr11:7692374 Cec07g0387 Cec-Chr7:3952144 7.80E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0387 - - - 0.0