Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0457 ATGCAGTGCCTTGGTGCTATCTGCGGCGCCGGCGTGGTGAAGGGATTCCAACCCAAGCCCTACGAAAGGCTCGGCGGTGGAGCGAATGTTGTGAACAGTGGATACACCAAAGGAGATGGGCTGGGCGCCGAGATCGTGGGTACTTTCATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGCAGCGCCAGAGACTCGCATGTTCCGATTTTGGCACCACTACCAATTGGATTTGCAGTGTTCTTAGTCCACTTGGCCACCATTCCGATAACCGGCACGGGCATTAACCCAGCCAGGAGTTTGGGAGCAGCCATCATCTTCAACCAGGACAAAGCATGGGACGATCACTGGATATTCTGGGTTGGACCATTCATCGGAGCAGCATTGGCAGCTTTACACCATCAAGTGGTGATTAGAGCCATTCCCTTCAAGTCCAAGTGA 447 53.91 MQCLGAICGAGVVKGFQPKPYERLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNQDKAWDDHWIFWVGPFIGAALAALHHQVVIRAIPFKSK 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4766015 4766628 - CePI673135_07g004570.1 Cec07g0457 207236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0457 148 Gene3D Glycerol uptake facilitator protein. 1 147 IPR023271 -
Cec07g0457 148 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 147 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Cec07g0457 148 Pfam Major intrinsic protein 1 136 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g0457 148 SUPERFAMILY Aquaporin-like 2 140 IPR023271 -
Cec07g0457 148 PRINTS Major intrinsic protein family signature 79 101 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g0457 148 PRINTS Major intrinsic protein family signature 119 139 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g0457 148 PRINTS Major intrinsic protein family signature 43 61 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g0457 148 FunFam Putative aquaporin PIP-type 7a 13 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0457 Cec-Chr7:4766015 Cec07g0459 Cec-Chr7:4774806 6.00E-83 dispersed
Cec07g0456 Cec-Chr7:4759260 Cec07g0457 Cec-Chr7:4766015 1.40E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0457 K09872 - csv:101214754 297.36