Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec07g0459 | ATGGAGGGGAAGGAGGAAGATGTCCGACTGGGAGCCAACAAGTTCAACGAGAGGCAGCCCATTGGGACGGCGGCGCAGAGCCAAGACAGCGCCAAGGACTACAAGGAGCCACCACCGGCGCCTCTGTTCGAGCCAGACGAGCTCACTTCATGGTCCTTTTACAGAGCTGGAATCGCAGAGTTTTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGGGTCGTCCGGTCCAACGAAGCCAATGGCAACACCTGTAAGACCGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGGGGTATGATTTTTGCTCTGGTTTACTGTACTGCTGGAATCTCCGGTGGCCACATTAACCCTGCAGTGACTTTTGGGCTGTTTCTGGCGAGAAAGCTGTCGTTGACCAGGGCGATTTTCTACATAGCGATGCAGTGCCTTGGTGCTATCTGCGGCGCCGGCGTGGTGAAGGGATTCCAACCCAAGCCCTACGAAAGGCTCGGCGGTGGAGCGAATGTTGTGAACAGTGGATACACCAAAGGAGATGGGCTGGGCGCCGAGATCGTGGGTACTTTCATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGCAGCGCCAGAGACTCGCATGTTCCGATTTTGGCACCACTACCAATTGGATTTGCAGTGTTCTTAGTCCACTTGGCCACCATTCCGATAACCGGCACGGGCATTAACCCAGCCAGGAGTTTGGGAGCAGCCATCATCTTCAACCAGGACAAAGCATGGGACGATCACTGGATATTCTGGGTCGGACCATTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGTGATTAGAGCCATTCCCTTCAAGTCCAAATGA | 879 | 54.27 | MEGKEEDVRLGANKFNERQPIGTAAQSQDSAKDYKEPPPAPLFEPDELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIAMQCLGAICGAGVVKGFQPKPYERLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNQDKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4774806 | 4775851 | - | CePI673135_07g004590.1 | Cec07g0459 | 207238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec07g0459 | 292 | SUPERFAMILY | Aquaporin-like | 47 | 285 | IPR023271 | - | |
| Cec07g0459 | 292 | CDD | MIP | 55 | 283 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 291 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
| Cec07g0459 | 292 | FunFam | Probable aquaporin PIP1-2 | 40 | 292 | - | - | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 263 | 283 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
| Cec07g0459 | 292 | Gene3D | Glycerol uptake facilitator protein. | 40 | 291 | IPR023271 | - | |
| Cec07g0459 | 292 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Cec07g0459 | 292 | NCBIfam | MIP family channel protein | 59 | 280 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec07g0459 | 292 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g0253 | Cec-Chr1:2518083 | Cec07g0459 | Cec-Chr7:4774806 | 3.50E-140 | dispersed | |
| Cec07g0456 | Cec-Chr7:4759260 | Cec07g0459 | Cec-Chr7:4774806 | 6.10E-164 | dispersed | |
| Cec07g0457 | Cec-Chr7:4766015 | Cec07g0459 | Cec-Chr7:4774806 | 6.00E-83 | dispersed | |
| Cec07g0459 | Cec-Chr7:4774806 | Cec08g0780 | Cec-Chr8:19589521 | 3.80E-105 | dispersed | |
| Cec07g0458 | Cec-Chr7:4766688 | Cec07g0459 | Cec-Chr7:4774806 | 2.30E-64 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec07g0459 | K09872 | - | csv:101215145 | 575.859 |