Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0474 ATGACGAATTTACCCTCTCCGGCCGTCGCCGTCACTGTCCTCACCCTCATCGCCGTCGTTTTCCCGTTGTTCCCGGCGATCCAAGCTCTCGGTTCAGCCTCAACCCTCGCCGTCAGCTACGGCTCCGGAACCGTCTGTGGCATCGTCGCCGAGCAGCCGACCCAAAGGATTTTATGTTTCCGTGACGGTCAAACCATATTTATTGAACCCCATATCTCCTTCTCCGCCGTATCCGGCGGCCGGAATACCTTCTGCGGTATAAGGTCCGGCGGTTACACCCTCCTCTGCTGGGACGTCAACTCGACCACCGCTACGTTTTCCCGGAGAAGACTTTACTACAGCCCCACCGTTCTTCTGGAGAATCTCGCGGTCGGCGACGAGCAAATCTGCGCCACGTTGGTTGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAGTGTTGGATTTTCTTCTGTTCAATATGACTCAATCTCTTCTGGGTATGGGTTTTCTTGTGGGATTTTGAAAGGGAGTCAATCCATCCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGTAATCGAAAATGGGTTTCGAAATATTTCAATGTTGAGCATCGTGGCCGGTGGGTTTCATGCCTGTGGATTGAATTCCTCTGGTGGGTTGGTTTGTAAAGGGAATAACGATTTTGGGCAGTTGGATTTTCCTTCAAATACATCCATGGGGTTCTCTGAATTAGCACTCGGTGAGCGCCATAGCTGTGGGATTTTAGTCTCGAATGGATCAGTGGTTTGTTGGGGCGGCTTGGGATTTTCTGTTGATTCGATTCGAGAAACTTCTTTTGAGTTAATTTCTTCAGGATCTGATTTTGTTTGTGGTTTAACGACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGTTGGTCCAATGATTCTTTTGGTCTTTCTTCACTTTCTCTTCCCAAGATTCTTCCTGGCCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGGGTTTATCCTTTATCTCAAACCCTCTGTTCTAATTCTGGGAATGTCTGTAATCGCTGTTTGTTTACTGCTTCAACGCCGCCACCGCCTCTGCCATCGTCTCCCCCTCCGCAGCGGTTGCCACCGCCAACGGTGAAGGCCGCGTCACCTCCGCCGGCTGCCTTGAGAAAGGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGTGCCTTTGCTGGGATTTGCACTATTGTTTACTGTTTGTGGACTGGTGCTTGTTTTGGGCATAAGAAGATACATAACTCTGTTCAGCCTACCATCACTAGAGCTGCTAGTTCGAATGGTGGAACGACGACTTCAAACACAAACAACAGCCCTCCGTCTCGGTCGTTGACGATACGACGTCAAGGCTCACGGATAATGCGAAGGCAGAGGAGTGGCACCTCATCTAAGCATGCCGATAGAGCAGAAGAATTCACTCTAGCAGAGCTTGCTATGGCTACCAATGATTTCTCTCCTGAGAACAAGATTGGTGAGGGGAGCTTCGGCGTTGTGTACCGAGGGAAACTGTACGATGGCCGGGAAGTTGCGATTAAGAGGGGCGAAACAGGACCGAAAACTAAGAAGTTTCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCATTCTTGTCTAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAGGAGAAAGATGAGAGACTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTATAATCATCTTCATGTCAAGAACAATTTTGAGAAAGCCAGCAGTGTTATAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCACAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCATCCAACATACTCCTCGACGCGAATTGGACGGCGAGAGTATCTGACTTCGGGTTGTCATTGATGAGTCCAGGGTCGGACCGTGACTACCAACCAACAAAGGCAGCTGGGACGGTTGGTTACATTGATCCTGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTTAAGGATGATGAACAAGGAGGGACACCGGTCAGCGTGGTCGATCATGCGGTGCCTGTGATTATGGTTGGAGAATTGGTGAAGATTTTGGATCAGAGAGTTGGGCCACCACAGATGAACGAAGCGGAGGCGGTGGAGCTGGTGGCTTACACAGCGATGCATAGTGTGAATTTGGAAGGGAAAGATCGGCCGACGATGACCGACATTGTTGCTAATTTGGAACGAGCTTTGAATCTTTGTGATGATAGCTATGGTAGCATCTCCAGTGGTGGCATTTCCATTGTTTCAGAGTGA 2418 48.26 MTNLPSPAVAVTVLTLIAVVFPLFPAIQALGSASTLAVSYGSGTVCGIVAEQPTQRILCFRDGQTIFIEPHISFSAVSGGRNTFCGIRSGGYTLLCWDVNSTTATFSRRRLYYSPTVLLENLAVGDEQICATLVGAGNVTCWREGNNASVGFSSVQYDSISSGYGFSCGILKGSQSIRCWGRNSSIATVIENGFRNISMLSIVAGGFHACGLNSSGGLVCKGNNDFGQLDFPSNTSMGFSELALGERHSCGILVSNGSVVCWGGLGFSVDSIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNDSFGLSSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSNSGNVCNRCLFTASTPPPPLPSSPPPQRLPPPTVKAASPPPAALRKGLLAFGIVGSVGAFAGICTIVYCLWTGACFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAMATNDFSPENKIGEGSFGVVYRGKLYDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHVKNNFEKASSVINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDHAVPVIMVGELVKILDQRVGPPQMNEAEAVELVAYTAMHSVNLEGKDRPTMTDIVANLERALNLCDDSYGSISSGGISIVSE 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5069643 5072060 - CePI673135_07g004740.1 Cec07g0474 207253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0474 805 Pfam Regulator of chromosome condensation (RCC1) repeat 201 228 - -
Cec07g0474 805 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524(InterPro)
Cec07g0474 805 MobiDBLite consensus disorder prediction 435 460 - -
Cec07g0474 805 MobiDBLite consensus disorder prediction 360 381 - -
Cec07g0474 805 Gene3D Phosphorylase Kinase; domain 1 458 576 - -
Cec07g0474 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 794 IPR044815 GO:0004674(InterPro)
Cec07g0474 805 FunFam serine/threonine-protein kinase-like protein CCR1 465 576 - -
Cec07g0474 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g0474 805 SUPERFAMILY Protein kinase-like (PK-like) 477 781 IPR011009 -
Cec07g0474 805 Gene3D - 71 308 IPR009091 -
Cec07g0474 805 ProSiteProfiles Protein kinase domain profile. 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0474 805 Gene3D Transferase(Phosphotransferase) domain 1 577 793 - -
Cec07g0474 805 SMART serkin_6 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0474 805 SUPERFAMILY RCC1/BLIP-II 73 304 IPR009091 -
Cec07g0474 805 MobiDBLite consensus disorder prediction 435 479 - -
Cec07g0474 805 Pfam Protein kinase domain 498 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0474 Cec-Chr7:5069643 Cec10g2293 Cec-Chr10:37101359 4.70E-57 dispersed
Cec03g0070 Cec-Chr3:740034 Cec07g0474 Cec-Chr7:5069643 1.00E-183 transposed
Cec04g1035 Cec-Chr4:29912444 Cec07g0474 Cec-Chr7:5069643 5.80E-54 transposed
Cec07g1687 Cec-Chr7:32466506 Cec07g0474 Cec-Chr7:5069643 1.20E-83 transposed
Cec08g1177 Cec-Chr8:23641667 Cec07g0474 Cec-Chr7:5069643 1.50E-48 transposed
Cec11g0646 Cec-Chr11:7094618 Cec07g0474 Cec-Chr7:5069643 3.30E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72121 PF00069 Pkinase 1.20E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0474 - - - 0.0