Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec07g0476 | ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAACCCGCGTTGGGGATTAATTTTGCAAGAGATGGGATGAAGCGTAGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGTTGTTTTTGGGCTGGATGCATGCAACTCTCATTGCCAATGACCTCAGAAAGAGGAGAAAGGGTGTTGCAGTCAAGCTCCATCTTAAAAAAATTTAGGTGGACCATGATGGGTTGA | 465 | 48.82 | MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERCFWAGCMQLSLPMTSERGERVLQSSSILKKFRWTMMG | 154 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 5112297 | 5113970 | + | CePI673135_07g004760.1 | Cec07g0476 | 207255 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec07g0476 | 154 | PANTHER | CPG BINDING PROTEIN | 7 | 117 | IPR045104 | GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro) | |
| Cec07g0476 | 154 | Pfam | Alfin | 10 | 117 | IPR021998 | GO:0006355(InterPro)|GO:0042393(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec07g0476 | Cec-Chr7:5112297 | Cec11g0170 | Cec-Chr11:1873021 | 9.40E-47 | dispersed | |
| Cec10g2211 | Cec-Chr10:36517318 | Cec07g0476 | Cec-Chr7:5112297 | 9.70E-52 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec07g0476 | K26274 | - | csv:101211934 | 245.358 |