Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0486 ATGAGAAGACTCCTAAGTTTTAAGAACACATGGGGAATTGCTTTGTCTGGTCAAACAGTATTACACCACTGCTACAGCCTCTATCCAATCTCTGCCTCCGTTGATCAGCCATTGGCTGAGGCAGATCGACACATAGATTTGCTGCCCAGATCCGTCTTCAATACGCATCTCAGGCCTTCTCGATTTCTCTCTGTTGGCTACCAGTTTCTTCAATCATTGAACCTCTTTCTTCTTTCAATTTACTTACAGGAACTGGATATGTGCAGTGGCTCTAAGAATAAAGTTGCTTCCTCGAATTCCGCCATGGAAGCTAGGTTTCTGAAGCTTAGCGAGGGGGCTTTGTTCTCCGCGAATTCAATCTTGCTTGAACTATCAGCCTCTGATGATGTAGAAGGGTTCAAGAGAGAGGTTGAAGAAAAGGATTTGGATGTTGATGAGCCAAGCTGCTGGTATGGAAGAGGAATTGGGTCAAAGAAGATGGGTTTTGAAGAAAGAACTCCATTGATGATTGCTGCCATGTTTGGAAGCTCCAAGGTTGTCAAGTACTTAATTGAGACGGGCAAAGTTGATGTCAACAGGGCTTGTGGTTCAGATTTGACCACTGCCCTTCACTGTGCCACTGCTGGTGGCTCTTGTTCTTCCCTTGAGACCATCAAGCTCTTGCTAGATGGATCTGCTAACGTCGATTGTGTCGATGCCTATGGGAGAAAACCTGTCGATTTGATTGTTTCAGCTTGCAGGATTGTGCTCAATTCGGGAAGAAAGGCTATGGAGATGTTGTTGAGAGGAGATGGTATGGCTGGGGAAGGTGATCTGAGTCTTTACCTTGAAGAAGACCAGCAGAAGATCACAGCTTCCCAATCTGCAAAAGAAGGAAGTGACAAGAAAGAGTATCCAGTGGATGTATCGCTGCCCGACATCAACAGCGGGATATACGGTACCGATGATTTCAGGATGTATACATTCAAAGTGAAGCCTTGTTCGAGGGCGTATTCACACGATTGGACCGAGTGCCCTTTTGTTCATCCTGGCGAGAACGCTAGGCGTAGAGACCCCAGGAAGTACCCGTATAGTTGCGTCCCGTGCCCTGAATTCCGGAAGGGGGCTTGCCCAAAGGGAGATTCCTGTGAGTATGCACATGGTGTTTTTGAGTCTTGGCTCCACCCCGCTCAATACCGAACCCGGCTCTGTAAGGATGAGACTGGCTGCACAAGAAAAGTCTGCTTCTTTGCTCACAAACCTGATGAGTTGCGCCCTGTGTATGCATCAACAGGCTCAGGCATGCCCTCACCTAGGTCTCTTTCGAGCAGTGCTGCAGATATGTCTACCATGAGCCCGCTTGCTCTTGGTTCATCATCGTTGTCCTTGCCGACTACCTCAACACCTCCCATGTCTCCCTTAGCATCAGTGTCTTCCCCGAAAAATGGGAACTTGTGGCAGAACAAGATTAACCTTACCCCTCCTGCTCTGCAGCTCCCTGGTAGCCGGTTAAAGGCCACCTTGAGCGCAAGAGATTTGGATTTGGAGATGGAATTGCTCGGGTTAGAAAAGAACGCGAGCCAATTACAACATCAACAACAGTTGATCGACGAGATAGCCCGGCTCTCCTCTCCTTCTTACTGGAGTGCAGATGTAAGCAGGAGTGCAGAGTTGAAGCCAGGAAACCTCGATGACATGTTTGGATCATTAGATTCTTCCTTATTGTCTCAGTTGCAAGGCACCTCGCTAAAGACGCCAATCTCAGCTCAAGTTCAATCTCCAACTGGGCTGCAGATGCGCCAAAACATCAACCAACTCCGTGCAAGTTACCCAGCTAACCTATCTTCCTCACCTGTAAAGAAACCCACTTCTTTTGGCTTTGACTCATCAAGTGCAGTGGCAGCTGCAGTTATGAACTCAAGGTCCGCTGCCTTTGCTAAACGAAGCCAGAGTTTCATCGATCGAGCCGCAGTGACTCGTCTTCCTGGGTTTACCGGAGCTGCAAATTCTGCAGCTACAATGTCTTCCCATCTCTCTGATTGGAACTCGCCTGATGGAAAACTAGACTGGGGAGTGCATGGCAACGATCTCAACAAACTCAAGAAATCTGCTTCGTTTGGGATCCGAAACAACGGCATCGGAACTCCCACATTTGCTCCACCAGTAGAGGAGCCTGATGTCTCTTGGGTCAACTCCTTGGTCAAAGACGTTCCATCGGAAAGCTTCGGGCTGTTCGGTGCCGAGAAGCGTCCATACAGCCTCAAAAGAGAAATCAACGAGATGCTCCCGTCCTGGATGGAGCAGCAGTTGTATGCAGAGCAGGAGCAGATAGTGGCATAA 2319 48.6 MRRLLSFKNTWGIALSGQTVLHHCYSLYPISASVDQPLAEADRHIDLLPRSVFNTHLRPSRFLSVGYQFLQSLNLFLLSIYLQELDMCSGSKNKVASSNSAMEARFLKLSEGALFSANSILLELSASDDVEGFKREVEEKDLDVDEPSCWYGRGIGSKKMGFEERTPLMIAAMFGSSKVVKYLIETGKVDVNRACGSDLTTALHCATAGGSCSSLETIKLLLDGSANVDCVDAYGRKPVDLIVSACRIVLNSGRKAMEMLLRGDGMAGEGDLSLYLEEDQQKITASQSAKEGSDKKEYPVDVSLPDINSGIYGTDDFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGACPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCTRKVCFFAHKPDELRPVYASTGSGMPSPRSLSSSAADMSTMSPLALGSSSLSLPTTSTPPMSPLASVSSPKNGNLWQNKINLTPPALQLPGSRLKATLSARDLDLEMELLGLEKNASQLQHQQQLIDEIARLSSPSYWSADVSRSAELKPGNLDDMFGSLDSSLLSQLQGTSLKTPISAQVQSPTGLQMRQNINQLRASYPANLSSSPVKKPTSFGFDSSSAVAAAVMNSRSAAFAKRSQSFIDRAAVTRLPGFTGAANSAATMSSHLSDWNSPDGKLDWGVHGNDLNKLKKSASFGIRNNGIGTPTFAPPVEEPDVSWVNSLVKDVPSESFGLFGAEKRPYSLKREINEMLPSWMEQQLYAEQEQIVA 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5458420 5463322 + CePI673135_07g004860.1 Cec07g0486 207265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0486 772 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 360 381 IPR000571 GO:0046872(InterPro)
Cec07g0486 772 Gene3D - 357 419 - -
Cec07g0486 772 Pfam Ankyrin repeats (3 copies) 163 230 IPR002110 GO:0005515(InterPro)
Cec07g0486 772 FunFam Zinc finger CCCH domain-containing protein 66 314 382 - -
Cec07g0486 772 ProSiteProfiles Ankyrin repeat profile. 163 187 IPR002110 GO:0005515(InterPro)
Cec07g0486 772 ProSiteProfiles Ankyrin repeat profile. 198 233 IPR002110 GO:0005515(InterPro)
Cec07g0486 772 ProSiteProfiles Zinc finger C3H1-type profile. 356 383 IPR000571 GO:0046872(InterPro)
Cec07g0486 772 MobiDBLite consensus disorder prediction 420 471 - -
Cec07g0486 772 MobiDBLite consensus disorder prediction 426 471 - -
Cec07g0486 772 Gene3D - 116 258 IPR036770 -
Cec07g0486 772 PANTHER UNKEMPT FAMILY MEMBER 158 729 IPR045234 -
Cec07g0486 772 ProSiteProfiles Ankyrin repeat region circular profile. 163 187 - -
Cec07g0486 772 SMART c3hfinal6 356 382 IPR000571 GO:0046872(InterPro)
Cec07g0486 772 SMART c3hfinal6 391 414 IPR000571 GO:0046872(InterPro)
Cec07g0486 772 SUPERFAMILY Ankyrin repeat 160 240 IPR036770 -
Cec07g0486 772 SMART ANK_2a 163 193 IPR002110 GO:0005515(InterPro)
Cec07g0486 772 SMART ANK_2a 198 230 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0486 Cec-Chr7:5458420 Cec10g1729 Cec-Chr10:31956179 1.60E-131 dispersed
Cec02g2051 Cec-Chr2:38237698 Cec07g0486 Cec-Chr7:5458420 2.50E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29890 PF12796 Ank_2 5.60E-09 CL0465 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0486 - - - 0.0