Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec07g0494 | ATGTTCGCAGTTGCAGTGCCGAAGACGACGATGACTCCGTTATTCTCATCTCCAAAGCTCCCTTCACTACTCTACAAGTCCTCTGTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCGAGATCGTTGTCCAGTCCGAGGAACCTTCATGTTTCTGCATCGTCGTCGTCGTCGTCTGTTGATACGGTTTTGAAGAGGAAGAGGCCGGCGAGAATCGACGTGCCGCCGAGTATGCCGTCGATTGGATTTGAATTTGGAATATTCGAGGCGCCGGAGGTGATGGAGGAGGAAGGAGAAGGATATTCTGTTTATTGTAAAAGAGGAAGAAGACGGATCAGCGCTATGGAGGATCGATTCTCAGCTACCGTCGGAATTCAAGGAGATTCTCGCCAGGCTTTCTTCGGAGTTTTCGACGGACACGGCGGAGCGAAAGTGGCGGAAATCGCAGCGAAAAGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGATCAGAGTCGGAACTGGAGGAAGCAATCAAAGACGGATATCTGACGACGGATCGGGAAGTATCGGAGGAAGGCGTGAGCGGCGGCGGCGCTTGTTGCGTGACTGCATTGATACGGAACGGAAATCTGGCAGTCTCGAACGTTGGCGATTGTCGTGCTGTGTTGAGCAGAAAGGGAAAAGCGGAAGCCCTAACTTCGGATCACAGGGCGTGCAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGAGGTTATGTAGATTGTTGCGGTGGTGGATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGAGTGATGAAGATCGAGGATGATTGTCATTTCTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGGTTACAAATCAGGAAGCAGTAGACATAGTAGAGGCAGTATGCGGCGTAGAGATAATGAAGAAACCAAATCCGGCATTAATAATGTCGGCCTGCAAACAGTTGGCGACTTTGTCAACATCAAGAGGCTCAATCGACGATACCACTGTTATGATCATCAAACTAAATTCCCTTTTTCATTCCTCAGCCTCAATTAATCATCATCATTAA | 1137 | 48.37 | MFAVAVPKTTMTPLFSSPKLPSLLYKSSVNSSSSSSSSSSSSSSPRSLSSPRNLHVSASSSSSSVDTVLKRKRPARIDVPPSMPSIGFEFGIFEAPEVMEEEGEGYSVYCKRGRRRISAMEDRFSATVGIQGDSRQAFFGVFDGHGGAKVAEIAAKRMSENVIDQVTRRSESELEEAIKDGYLTTDREVSEEGVSGGGACCVTALIRNGNLAVSNVGDCRAVLSRKGKAEALTSDHRACREDERNRIEKSGGYVDCCGGGWRVQGTLAVSRAIGDEHLKQWVISEPETRVMKIEDDCHFLILASDGLWDKVTNQEAVDIVEAVCGVEIMKKPNPALIMSACKQLATLSTSRGSIDDTTVMIIKLNSLFHSSASINHHH | 378 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 5579064 | 5581069 | + | CePI673135_07g004940.1 | Cec07g0494 | 207273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec07g0494 | 378 | ProSiteProfiles | PPM-type phosphatase domain profile. | 105 | 364 | IPR001932 | - | |
| Cec07g0494 | 378 | Gene3D | - | 102 | 368 | IPR036457 | - | |
| Cec07g0494 | 378 | SUPERFAMILY | PP2C-like | 105 | 366 | IPR036457 | - | |
| Cec07g0494 | 378 | SMART | PP2C_4 | 98 | 362 | IPR001932 | - | |
| Cec07g0494 | 378 | MobiDBLite | consensus disorder prediction | 10 | 68 | - | - | |
| Cec07g0494 | 378 | PANTHER | PROTEIN PHOSPHATASE | 95 | 362 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| Cec07g0494 | 378 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
| Cec07g0494 | 378 | CDD | PP2Cc | 105 | 364 | IPR001932 | - | |
| Cec07g0494 | 378 | Pfam | Protein phosphatase 2C | 115 | 355 | IPR001932 | - | |
| Cec07g0494 | 378 | ProSitePatterns | PPM-type phosphatase domain signature. | 138 | 146 | IPR000222 | GO:0043169(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g0060 | Cec-Chr3:613016 | Cec07g0494 | Cec-Chr7:5579064 | 2.60E-93 | dispersed | |
| Cec07g0494 | Cec-Chr7:5579064 | Cec11g0835 | Cec-Chr11:10298569 | 3.60E-68 | dispersed | |
| Cec07g0494 | Cec-Chr7:5579064 | Cec07g0291 | Cec-Chr7:2857153 | 3.90E-30 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec07g0494 | K17506 | - | csv:101208170 | 558.14 |