Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0514 ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCCATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGATGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCTCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAGCCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGATATAGTTTCTTAA 501 47.7 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNLVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5931469 5932455 - CePI673135_07g005140.1 Cec07g0514 207293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0514 166 Coils Coil 85 105 - -
Cec07g0514 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Cec07g0514 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 115 - -
Cec07g0514 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0916 Cec-Chr1:10961322 Cec07g0514 Cec-Chr7:5931469 4.40E-45 dispersed
Cec02g1940 Cec-Chr2:37289655 Cec07g0514 Cec-Chr7:5931469 2.60E-45 dispersed
Cec03g0237 Cec-Chr3:2643518 Cec07g0514 Cec-Chr7:5931469 2.10E-34 dispersed
Cec03g0239 Cec-Chr3:2671772 Cec07g0514 Cec-Chr7:5931469 1.00E-37 dispersed
Cec07g0514 Cec-Chr7:5931469 Cec09g2359 Cec-Chr9:40416421 4.50E-39 dispersed
Cec02g2200 Cec-Chr2:39452897 Cec07g0514 Cec-Chr7:5931469 2.30E-34 transposed
Cec04g2202 Cec-Chr4:39766851 Cec07g0514 Cec-Chr7:5931469 5.70E-31 transposed
Cec02g2031 Cec-Chr2:38077549 Cec07g0514 Cec-Chr7:5931469 8.00E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29892 PF03195 LOB 3.70E-42 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0514 - - - 0.0