Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0550 ATGGGAGCTTCTAGCCTCCCTTGTTTTTCATCGCTATTTGCAGTTTTTCCACTTCAAAATAATGCTCACAACAAATCTTTGCCATTTTCTTCAAATCTTTCAAAACCCCTTTTCCGATTGAACAGGATTTGCTGCGGAGTCCCTGAGAGTGGAATTCAGCAAAACCCCTCAACTTCCAGACCTTCCTCTTCCAAGAACAGGATGGAAGAGTACAATTTGGCTATGAAGAAGATGATGAGGAACCCCTATGAATATCACCATGAACTGGGCATGAACTATACTGTGATAGCTGACAATTTGATCGTCGGTTCCCAGCCTCAGAAACCTGAAGATATCAATTTCTTGAAGGAGGAAGAAGGTGTTGCCTATATTCTAAATTTACAGCAGGACAAGGATGTTGAGTACTGGGGAATCGACTTACGATCAATTATAGAAAGATGTAAAGAACTTCGAATTCATCATATGAGGCAACCAGCAAAAGATTTTGATCCAGATTCCCTGAGAAATGGATTGCCTAAAGCTGTTTCCTTGTTAGAATGGGCGATCTCAGAGGGTAAAGGAAAAGTATACGTGCATTGCACCGCTGGACTGGGAAGGGCCCCCGCCGTCGCAATAGCTTACCTGTACTGGTTTTGCGGAATGAATTTAAATACAGCATATGAAGCACTGACCTCTAAAAGACCTTGTGGACCAAATAAAAGAGCGATCCGCGGAGCCACATACGATCTATCTAAAAATGACCCATGGAAGGAGCCATTTGAGAAACTTGAGTTCATTGCTATTGAGAATAAGAGTTGGGATAGTAGAGTGTTGCACTTGATCTCTGCACAGAAATTTGGTTTCCTAATCTTGAAATTTTCTCTAGGCCAGGCAGAGGGATTTTCATTTTGTCTAATAATTATCTTGCTGTTTCCTAGGAAGATTGCAATTTTGTTTGTGTTTGATATATGA 951 41.11 MGASSLPCFSSLFAVFPLQNNAHNKSLPFSSNLSKPLFRLNRICCGVPESGIQQNPSTSRPSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEGVAYILNLQQDKDVEYWGIDLRSIIERCKELRIHHMRQPAKDFDPDSLRNGLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPNKRAIRGATYDLSKNDPWKEPFEKLEFIAIENKSWDSRVLHLISAQKFGFLILKFSLGQAEGFSFCLIIILLFPRKIAILFVFDI 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6567984 6570854 - CePI673135_07g005500.1 Cec07g0550 207329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0550 316 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 228 IPR000387 GO:0016311(InterPro)
Cec07g0550 316 Gene3D Protein tyrosine phosphatase superfamily 75 274 IPR029021 -
Cec07g0550 316 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 56 251 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Cec07g0550 316 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 84 234 IPR029021 -
Cec07g0550 316 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203(InterPro)
Cec07g0550 316 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 75 277 - -
Cec07g0550 316 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470(InterPro)
Cec07g0550 316 Pfam Dual specificity phosphatase, catalytic domain 115 229 IPR000340 GO:0016311(InterPro)
Cec07g0550 316 SMART dsp_5 92 242 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2366 Cec-Chr5:34932563 Cec07g0550 Cec-Chr7:6567984 3.30E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0550 - - - 0.0