Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0553 | ATGTCCAAAGAAAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCATCCCCAGCAAATTATGGGGAGAAGAACCTCATTGCAAGCTCCTCCTGGGACACTTAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCATACTTCTCCCCTCATGAGCCTCATAAATTTGCCTCTGTCCACAAGGTTTTCGGCGCTAGCAACGTCTCCAAGATGCTCATGGAAGTTTCGGAGAATCAGAGAGCGGATGCTGCGAATAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAGCACCAAATTCAAGCCTTACAAGCTGAGCTCAATGCAGTGAGAGCTGAGATTTTAAGACATAAATTTAGAGAAGCTAATAATATGATGCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCTTCTTCTACGGAGGTCGTTTCGGTCGCTGTGCCACCACCGCCTCCGCCACCACCGCTACCTCCACCGCCTCATCATGCTTCTTCTTCTACTTCCTCATTGTACAACCGACCGGTGGTGGCCGTGGCGGCTGATTATAGTACTATTTCAAGTGATGAAAATGTTACCTACTTTGTTACTACTTCTAGTACTGCTCATCAATTGAATTCTTAG | 732 | 45.22 | MSKERERFDEIAKKIKRETDVSSNIHPQQIMGRRTSLQAPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRHKFREANNMMHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHASSSTSSLYNRPVVAVAADYSTISSDENVTYFVTTSSTAHQLNS | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6641470 | 6642723 | + | CePI673135_07g005530.1 | Cec07g0553 | 207332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0553 | 243 | MobiDBLite | consensus disorder prediction | 177 | 205 | - | - | |
Cec07g0553 | 243 | ProSiteProfiles | LOB domain profile. | 48 | 149 | IPR004883 | - | |
Cec07g0553 | 243 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 47 | 169 | - | - | |
Cec07g0553 | 243 | MobiDBLite | consensus disorder prediction | 182 | 199 | - | - | |
Cec07g0553 | 243 | Coils | Coil | 128 | 155 | - | - | |
Cec07g0553 | 243 | Pfam | Lateral organ boundaries (LOB) domain | 49 | 146 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0553 | Cec-Chr7:6641470 | Cec10g1403 | Cec-Chr10:28374804 | 5.50E-33 | dispersed | |
Cec11g0606 | Cec-Chr11:6664733 | Cec07g0553 | Cec-Chr7:6641470 | 5.30E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29894 | PF03195 | LOB | 2.20E-40 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0553 | - | - | - | 0.0 |