Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0553 ATGTCCAAAGAAAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCATCCCCAGCAAATTATGGGGAGAAGAACCTCATTGCAAGCTCCTCCTGGGACACTTAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCATACTTCTCCCCTCATGAGCCTCATAAATTTGCCTCTGTCCACAAGGTTTTCGGCGCTAGCAACGTCTCCAAGATGCTCATGGAAGTTTCGGAGAATCAGAGAGCGGATGCTGCGAATAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAGCACCAAATTCAAGCCTTACAAGCTGAGCTCAATGCAGTGAGAGCTGAGATTTTAAGACATAAATTTAGAGAAGCTAATAATATGATGCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCTTCTTCTACGGAGGTCGTTTCGGTCGCTGTGCCACCACCGCCTCCGCCACCACCGCTACCTCCACCGCCTCATCATGCTTCTTCTTCTACTTCCTCATTGTACAACCGACCGGTGGTGGCCGTGGCGGCTGATTATAGTACTATTTCAAGTGATGAAAATGTTACCTACTTTGTTACTACTTCTAGTACTGCTCATCAATTGAATTCTTAG 732 45.22 MSKERERFDEIAKKIKRETDVSSNIHPQQIMGRRTSLQAPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRHKFREANNMMHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHASSSTSSLYNRPVVAVAADYSTISSDENVTYFVTTSSTAHQLNS 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6641470 6642723 + CePI673135_07g005530.1 Cec07g0553 207332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0553 243 MobiDBLite consensus disorder prediction 177 205 - -
Cec07g0553 243 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Cec07g0553 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 169 - -
Cec07g0553 243 MobiDBLite consensus disorder prediction 182 199 - -
Cec07g0553 243 Coils Coil 128 155 - -
Cec07g0553 243 Pfam Lateral organ boundaries (LOB) domain 49 146 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0553 Cec-Chr7:6641470 Cec10g1403 Cec-Chr10:28374804 5.50E-33 dispersed
Cec11g0606 Cec-Chr11:6664733 Cec07g0553 Cec-Chr7:6641470 5.30E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29894 PF03195 LOB 2.20E-40 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0553 - - - 0.0