Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0579 | ATGGAGGCTTCTTCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAGTTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTAGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA | 471 | 39.28 | MEASSSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7332711 | 7334738 | + | CePI673135_07g005790.1 | Cec07g0579 | 207358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0579 | 156 | Pfam | Response regulator receiver domain | 25 | 149 | IPR001789 | GO:0000160(InterPro) | |
Cec07g0579 | 156 | Gene3D | - | 19 | 156 | - | - | |
Cec07g0579 | 156 | SMART | REC_2 | 23 | 151 | IPR001789 | GO:0000160(InterPro) | |
Cec07g0579 | 156 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 18 | 151 | IPR045279 | GO:0009736(InterPro) | |
Cec07g0579 | 156 | ProSiteProfiles | Response regulatory domain profile. | 24 | 155 | IPR001789 | GO:0000160(InterPro) | |
Cec07g0579 | 156 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cec07g0579 | 156 | SUPERFAMILY | CheY-like | 21 | 150 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0579 | Cec-Chr7:7332711 | Cec10g1628 | Cec-Chr10:30724162 | 8.60E-40 | dispersed | |
Cec07g0579 | Cec-Chr7:7332711 | Cec06g1863 | Cec-Chr6:31985770 | 2.50E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29896 | PF00072 | Response_reg | 1.10E-21 | CL0304 | Cec | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0579 | K14492 | - | csv:101208898 | 248.825 |