Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0579 ATGGAGGCTTCTTCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAGTTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTAGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA 471 39.28 MEASSSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7332711 7334738 + CePI673135_07g005790.1 Cec07g0579 207358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0579 156 Pfam Response regulator receiver domain 25 149 IPR001789 GO:0000160(InterPro)
Cec07g0579 156 Gene3D - 19 156 - -
Cec07g0579 156 SMART REC_2 23 151 IPR001789 GO:0000160(InterPro)
Cec07g0579 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 151 IPR045279 GO:0009736(InterPro)
Cec07g0579 156 ProSiteProfiles Response regulatory domain profile. 24 155 IPR001789 GO:0000160(InterPro)
Cec07g0579 156 MobiDBLite consensus disorder prediction 1 24 - -
Cec07g0579 156 SUPERFAMILY CheY-like 21 150 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0579 Cec-Chr7:7332711 Cec10g1628 Cec-Chr10:30724162 8.60E-40 dispersed
Cec07g0579 Cec-Chr7:7332711 Cec06g1863 Cec-Chr6:31985770 2.50E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29896 PF00072 Response_reg 1.10E-21 CL0304 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0579 K14492 - csv:101208898 248.825