Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0594 | ATGGAGACCTCGCCTTCCATTTCCGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGTACCTCCTCCAGATTTGGCCTCTCGCTCCCTTCCCTCAATTTCTTCCGTTCGCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCATCATGAATCCGACCCTGTAATCAACGCCGCTGCCACTCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATCACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACAACCTCTTCTGGTAATACTATCCCCTCTGGGGAGGTTTCCATAAGGATTATTGGTTCTGGTGAGCAAGATCCTTCTCCCAGTGGCTTGTTGCCAAATCAGGCTGGTTATGAGCAAAATGGCAGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCAACTGCTTCTTCATCTATTCAATCTGGAAGCACTCGTGTCGATGGAGAATCTGGAAATGGAATGGAAGAGAGTGTCAATAGAGATTCGTCTTACCAGAGATATGATATTCAGCAGGTTGCCAGATGGATTGAACAGATTCTTCCATTCTCTTTGCTATTGCTGATAGTCTTTATCCGTCAGCACTTAGAAGGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCGAACGACATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGAACTTCTATTGCATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATACCCCTTAGTCATGCTTCCACCAAAGACAGTACCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTTAACGATACGATGGTGAGGCAGTTTGCTATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGTCGGCAGGGTCAAATCTTAACTCTCGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTCTTGAATAAAGATCAAGGGAGCCTCTTTTCATCACTAACAACAGGATTATATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTCGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAATGCTGCGGGAGACCTCTGTGCCATTTGCCAGGAGAAGATGAATGCTCCAATCCTATTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAGAGAACTTGCCCTCTTTGCCGGGCACTGGTAAAGCCTGCAGAACTCCGAACATTTGGCGATGGATCAACCAGCTTACTCTTCCAGTTGTTTTAG | 1452 | 43.25 | METSPSISDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVHHESDPVINAAATPDLRVYSQNQNHLITTSSSSSSSSSSSATTSSGNTIPSGEVSIRIIGSGEQDPSPSGLLPNQAGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGSTRVDGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7636019 | 7643800 | - | CePI673135_07g005940.1 | Cec07g0594 | 207373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0594 | 483 | ProSiteProfiles | Zinc finger RING-type profile. | 422 | 460 | IPR001841 | - | |
Cec07g0594 | 483 | SUPERFAMILY | RING/U-box | 415 | 465 | - | - | |
Cec07g0594 | 483 | MobiDBLite | consensus disorder prediction | 155 | 184 | - | - | |
Cec07g0594 | 483 | PANTHER | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN | 17 | 483 | IPR044235 | GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:1904294(InterPro) | |
Cec07g0594 | 483 | Pfam | Ring finger domain | 421 | 460 | IPR001841 | - | |
Cec07g0594 | 483 | MobiDBLite | consensus disorder prediction | 82 | 184 | - | - | |
Cec07g0594 | 483 | MobiDBLite | consensus disorder prediction | 82 | 109 | - | - | |
Cec07g0594 | 483 | SMART | ring_2 | 422 | 459 | IPR001841 | - | |
Cec07g0594 | 483 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 396 | 469 | IPR013083 | - | |
Cec07g0594 | 483 | CDD | RING-HC_RNFT1-like | 420 | 460 | - | - | |
Cec07g0594 | 483 | ProSitePatterns | Zinc finger RING-type signature. | 437 | 446 | IPR017907 | - | |
Cec07g0594 | 483 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0740 | Cec-Chr4:26671992 | Cec07g0594 | Cec-Chr7:7636019 | 4.70E-157 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0594 | - | - | - | 0.0 |