Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0695 ATGGCCGGGATTGTCGCCGGCGACAGCGACAGTGCACCGGCTTTGGCTCTACTGGACTTTGTTCGCGATGTTGTTCGAATGTCGGCGGGGACGAACACTGGAGAGGTTTTCAAGAAGGATTGCACCGATCTGGTGCGTCGGATCGTGCTTTTGACGCATTTGTTTGAGGAAATCAGGGACTTCAATGGCGTCCAACTTCGACCTGTTGATGCATCTTCGTCTTCTTCTTCTTCTTGTGGCGCTGTTACTGTGAGGGATTCGCCTCAGTTTCCATGGCTTTGTGATTTAGTGACGGCATTGAAGGATACTAAGCGCCTCATTTTCATCGCTTCTACTTTCCGGTCCTGCGGCTCTTCTTCTGAAGAAGTTGCCAAGAAGATACTCTTTCAATTCCAATGTGTGACGTGGAAGTTAGAGAAGGCATTGGGCAATCTTCCATATGATCGCCTTGATATATCAGAGGAAGTTCAAGAACAGGTTGAATTAGTGAGAGCTCAATTGAGAAGAGCAGCAGAAAAATATGGGTCTCTGACTGCAATTCCACCATCTGTTGTTCAATCTCAGTTGTTGAAGAAAAATGTGGATCTCTTAAATTTGAACAACTGGGTTGATAACTTTGATGTTGAGGAGAATGGTATTGTTGATCATGAGATTACAGTGAAATTTGATGCATTTCCAAATTGTAGAGGGTTGATGAATGGCGGTGTGGATCAATTGATTTTCAAAGGACTTGAGAAACTTCCATCCTCTTCAGAGGCTTGTTCTAATGGACAGGATAATGACTCTGCCAGAAAGAGTGGGGACCAGGTGAAGAACCCAGATGGAGTTTCAATCCCTGATGATTTTCTATGCCCCATATCCTTGGAAATAATGAGAGATCCTGTTATTGTGTCCACAGGCCAGACGTATGAGAGATCTTATGTACAGAGGTGGATAGATTGTGGGAATACTACTTGTCCCAAAACTCAGCAGAAGCTCCAAAATTTGACTCTCACCCCAAATTATGTGTTGCGAAGTCTCATTAGTCAATGGTGTGTTAATAACAATATTGAGCAACCTACGGGATTAACCAATGGGAAGATCAAAAAGTGTGACGGATCATACCGTGACGTGTGTGAGGAGATGGCAGCCATTGAAACTCTGGTCCGCAAGCTAACTAGCTATTCGATTGAGGAGCGGAGAGCATCTGTGACTGAACTTCGATCTCTATCTAAAAGAAGCACGGATAATAGAATACTGATTGCTGAAGCAGGAGCAATTCCTGCCTTGGTCAATCTATTAACTTCTGATGACGTTTTAATACAAGAAAATGCAGTTACTTCCATTCTCAACCTTTCAATATATGAGAACAACAAGGGATTGATTATGCTTGCTGGTGCAATACCTTCCATTGTTCAAGTTCTTAGAGTTGGAAGTATGGAAGCAAGAGAAAATGCAGCAGCAACACTTTTCAGCTTGTCTCTTGCTGATGAAAATAGGATAATCATTGGTGCTTCTGGGGCTATTCCAGCTCTTGTGGATTTACTTGAAAATGGAAGCTCAAGAGGAAAGAAGGATGCTGCAACAGCACTATTTAATTTGTGCATTTATCAGGGGAACAAGGGAAGGGCTGTGAGGGCAGGGATCATTCCAGCTCTATTAAAGATGCTTACGGACTCAGTGAACTCGATGATCGACGAAGCTCTCACAATAATGTCGGTCCTGGCCAGCCATCAAGAAGCAAAAGTAGCCATGGTGAAAGCCAGTACCATACCTGTTCTAATAGACCTTCTGAGGACCGGATTGCCTCGCAACAAGGAAAATGCTGCTGCTATTTTGCTTGCTTTGTGTAAGCGAGATACCGACAACCTTTCTTGTATAAGTAGGCTTGGCGCCGTGATTCCACTGACAGAGCTTGCCAAGAGTGGCACGGAGAGAGCTAAAAGGAAGGCTACTTCATTATTGGAGCATCTTCGAAAACTGCAGCAGCTATAG 1974 44.02 MAGIVAGDSDSAPALALLDFVRDVVRMSAGTNTGEVFKKDCTDLVRRIVLLTHLFEEIRDFNGVQLRPVDASSSSSSSCGAVTVRDSPQFPWLCDLVTALKDTKRLIFIASTFRSCGSSSEEVAKKILFQFQCVTWKLEKALGNLPYDRLDISEEVQEQVELVRAQLRRAAEKYGSLTAIPPSVVQSQLLKKNVDLLNLNNWVDNFDVEENGIVDHEITVKFDAFPNCRGLMNGGVDQLIFKGLEKLPSSSEACSNGQDNDSARKSGDQVKNPDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLISQWCVNNNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSYSIEERRASVTELRSLSKRSTDNRILIAEAGAIPALVNLLTSDDVLIQENAVTSILNLSIYENNKGLIMLAGAIPSIVQVLRVGSMEARENAAATLFSLSLADENRIIIGASGAIPALVDLLENGSSRGKKDAATALFNLCIYQGNKGRAVRAGIIPALLKMLTDSVNSMIDEALTIMSVLASHQEAKVAMVKASTIPVLIDLLRTGLPRNKENAAAILLALCKRDTDNLSCISRLGAVIPLTELAKSGTERAKRKATSLLEHLRKLQQL 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12291413 12294572 - CePI673135_07g006950.1 Cec07g0695 207474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0695 657 Coils Coil 637 657 - -
Cec07g0695 657 FunFam RING-type E3 ubiquitin transferase 275 351 - -
Cec07g0695 657 Gene3D - 557 656 IPR011989 -
Cec07g0695 657 FunFam RING-type E3 ubiquitin transferase 361 454 - -
Cec07g0695 657 SMART arm_5 530 570 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART arm_5 407 447 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART arm_5 448 488 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART arm_5 571 611 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART arm_5 489 529 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART arm_5 613 653 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 Gene3D - 458 556 IPR011989 -
Cec07g0695 657 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 351 IPR013083 -
Cec07g0695 657 SUPERFAMILY ARM repeat 368 651 IPR016024 -
Cec07g0695 657 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 459 501 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 SMART Ubox_2 281 344 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec07g0695 657 FunFam RING-type E3 ubiquitin transferase 557 656 - -
Cec07g0695 657 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 500 542 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 MobiDBLite consensus disorder prediction 251 275 - -
Cec07g0695 657 Gene3D - 360 457 IPR011989 -
Cec07g0695 657 SUPERFAMILY RING/U-box 274 351 - -
Cec07g0695 657 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 418 460 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 PANTHER U BOX DOMAIN-CONTAINING 36 653 - -
Cec07g0695 657 Pfam U-box domain 278 348 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec07g0695 657 Coils Coil 153 173 - -
Cec07g0695 657 FunFam RING-type E3 ubiquitin transferase 455 555 - -
Cec07g0695 657 CDD RING-Ubox_PUB 279 331 IPR045210 -
Cec07g0695 657 Pfam Armadillo/beta-catenin-like repeat 407 446 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 Pfam Armadillo/beta-catenin-like repeat 490 528 IPR000225 GO:0005515(InterPro)
Cec07g0695 657 ProSiteProfiles U-box domain profile. 277 351 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2133 Cec-Chr2:38871217 Cec07g0695 Cec-Chr7:12291413 5.80E-61 dispersed
Cec05g2340 Cec-Chr5:34660502 Cec07g0695 Cec-Chr7:12291413 8.40E-09 dispersed
Cec06g0956 Cec-Chr6:13336091 Cec07g0695 Cec-Chr7:12291413 1.80E-16 dispersed
Cec07g0695 Cec-Chr7:12291413 Cec11g0628 Cec-Chr11:6917208 4.70E-39 dispersed
Cec07g0695 Cec-Chr7:12291413 Cec01g0614 Cec-Chr1:6608904 1.10E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0695 - - - 0.0