Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0721 ATGGCAATTTTACCCACCACCTCTTCAAGATTGGATCTCTCCATCTCTGCACCAGGCTTCAATTCATTCTCATCACCACTTCCTCCATCTGTAGGGAGAGATTTGGACATGAACAAAGCTCCAGATGAAGAAGAATGGATGATGGGAAGTATGGAGGAAGATGAAGAAAATAACAATGGAAGCAATAATCCAAGGAAGAAGCTGCGCTTGACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTTCGACAAAATCATACTTTAAACCCAAAACAGAAGGAGACTTTGGCAGAAGTGTTGAAGTTGAAGCCAAGGCAGGTTGAAGTTTGGTTTCAGAATCGAAGGGCCAGGAGCAAGTTAAAGCAAACAGAAATGGAATGTGAGTATTTGAAAAGATGGTTCGGGTTATTGACAGAACAGAACAAGAGACTGCAGAAGGAGGTGGAGGAGCTGAGGGCAATGAAGGTAGCGCCGCCGACGGTGATTTCACCGCACAGCTGCGAGCCGCTGCCAGCGTCGAATCTCACAATGTGCCCACGCTGCGAGCGCGTGACAACCACAGCCCTCGACAAGACCCGCATTGTCGTTTAA 591 46.87 MAILPTTSSRLDLSISAPGFNSFSSPLPPSVGRDLDMNKAPDEEEWMMGSMEEDEENNNGSNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKRLQKEVEELRAMKVAPPTVISPHSCEPLPASNLTMCPRCERVTTTALDKTRIVV 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13812448 13817979 + CePI673135_07g007210.1 Cec07g0721 207500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0721 196 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0721 196 SMART halz 121 164 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0721 196 MobiDBLite consensus disorder prediction 17 37 - -
Cec07g0721 196 CDD homeodomain 64 122 IPR001356 GO:0003677(InterPro)
Cec07g0721 196 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cec07g0721 196 Gene3D - 57 129 - -
Cec07g0721 196 Coils Coil 134 154 - -
Cec07g0721 196 Pfam Homeodomain 65 119 IPR001356 GO:0003677(InterPro)
Cec07g0721 196 FunFam Homeobox-leucine zipper protein 18 50 126 - -
Cec07g0721 196 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 50 188 IPR050762 -
Cec07g0721 196 SMART HOX_1 63 125 IPR001356 GO:0003677(InterPro)
Cec07g0721 196 SUPERFAMILY Homeodomain-like 48 122 IPR009057 -
Cec07g0721 196 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0608 Cec-Chr1:6506797 Cec07g0721 Cec-Chr7:13812448 1.20E-55 dispersed
Cec07g0721 Cec-Chr7:13812448 Cec10g0842 Cec-Chr10:16896854 6.80E-34 dispersed
Cec07g0721 Cec-Chr7:13812448 Cec09g0378 Cec-Chr9:3241315 1.00E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29902 PF00046 Homeodomain 1.10E-16 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0721 K09338 - csv:101222713 367.466