Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0762 ATGGAGAAGGAAATGACCGAAGACGAGCCTGAAGAAACTGAAGAAGACGTGAGATGGTTGTACGAAATTCAGAGGGGGCCAGAGTCTGTGTTGCAGTTATGGGCTTGTAGCTTCCACTCTGTCAATCACTTCCCAATGGATCCCCCAACCTCCTACCGTAGTCGCAGAACCACCAACAAATCTGAGCTCTACTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAACAATCCTGACGATCGGAATCTTCACCCTCCACGAAGGCCACCCACCGAAGGACAAGACCTTTACGCCACAATGCTCTATAAGGACGTTGATAAGCCCCGCGGCGACGACGACGACGACGATGATTCCTCTCTCCCTCCTCTCCTCAAACGTCTTCCCAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACCATGCTTTTGATTTCGATCACTATACTGAAGACTTCGGTACCATGATCGTCAAGACGGACAGAAATCGTCCTCGAAATCGCTCTATGTCTTCTTCAGTTTCGACGAAGCCTCGAACTTCGCCGCTGCCGTTTATGAACTTTCAGCCGGGGAGCCCCGGGAAGAGAGCTGGCAGTGAAGAAGGCGACGACAGCGAGGAAGATGATGGTGATGAGTATTCTACGTTTGTGGTGAGGTCCACGGGGAGGTCGCGGAACAGAGAATCTGTTAGTGGGACTGTTGTTCGAAGGACTGCTGGTAGTCGCAGTGGTTCCAGAGATGGAGGCGGAGGACATGAGGGGTCCACGATGGGCAGAGCGGTCGCCAGTATGCAAGGTATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCACCGAGGAGTGAGGAAGGCGGTGCTCGGATACGCAGTAAGGTATCCTCAAGTTCGATTCCGGAAAGCATCACCAGGGAAGATCCACATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGGTCCTATGGGGCTGTATATAAAGCAAGAGATATTAAGACCTCTGAGCTGGTTGCTATCAAGGTCATTTCTTTATGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGTCATCCAAATGTTGTTCGCTATCTTGGGAGCTATCAAGGAGAAGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACAGAGGAACCTCTAGAGGAATATCAGATTGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCAATATTCAAAGTTCACAGAGATATCAAGGGTGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTGACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCGATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGTTGTTCCATGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAAATGTTGAAGGATGGTGAGGGTGTCCACGGCCTGATGGGAGTTTATGTCCCTACTAGAACTAGAGGAAAAGTTGAGTGCATGAATGAGTTGGGTGGCCTTTGTGGGGCGAATTGGTGGGCGATTTTAATATCACTTGCTCTCGAGGTTTAA 1842 48.53 MEKEMTEDEPEETEEDVRWLYEIQRGPESVLQLWACSFHSVNHFPMDPPTSYRSRRTTNKSELYSTVVIHSNSDSDSDNNPDDRNLHPPRRPPTEGQDLYATMLYKDVDKPRGDDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDHAFDFDHYTEDFGTMIVKTDRNRPRNRSMSSSVSTKPRTSPLPFMNFQPGSPGKRAGSEEGDDSEEDDGDEYSTFVVRSTGRSRNRESVSGTVVRRTAGSRSGSRDGGGGHEGSTMGRAVASMQGMGELGFGKQRKGNGSPRSEEGGARIRSKVSSSSIPESITREDPHSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKDGEGVHGLMGVYVPTRTRGKVECMNELGGLCGANWWAILISLALEV 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15458882 15470165 - CePI673135_07g007620.1 Cec07g0762 207541

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0762 613 Gene3D Transferase(Phosphotransferase) domain 1 313 573 - -
Cec07g0762 613 FunFam serine/threonine-protein kinase dst1 isoform X1 314 570 - -
Cec07g0762 613 CDD STKc_MAP4K3_like 316 568 - -
Cec07g0762 613 FunFam Aurora kinase A 309 398 - -
Cec07g0762 613 ProSiteProfiles Protein kinase domain profile. 317 576 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0762 613 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524(InterPro)
Cec07g0762 613 SMART serkin_6 317 576 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0762 613 MobiDBLite consensus disorder prediction 274 313 - -
Cec07g0762 613 MobiDBLite consensus disorder prediction 70 138 - -
Cec07g0762 613 MobiDBLite consensus disorder prediction 221 244 - -
Cec07g0762 613 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 250 568 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Cec07g0762 613 Pfam Protein kinase domain 317 567 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g0762 613 SUPERFAMILY Protein kinase-like (PK-like) 314 567 IPR011009 -
Cec07g0762 613 MobiDBLite consensus disorder prediction 171 191 - -
Cec07g0762 613 MobiDBLite consensus disorder prediction 76 91 - -
Cec07g0762 613 MobiDBLite consensus disorder prediction 161 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0762 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0762 Cec-Chr7:15458882 Cec11g1200 Cec-Chr11:24899978 3.00E-269 dispersed
Cec07g0762 Cec-Chr7:15458882 Cec03g1594 Cec-Chr3:34045737 4.10E-37 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec11g1834 . 69 754 MAP Kinase Kinase Kinase Kinase AT1G53165 63.9 2.9e-225 778.5
Cec11g1200 . 254 514 MAP Kinase Kinase Kinase Kinase AT1G53165 53.1 3.3e-67 253.4
Cec07g0762 . 315 567 MAP Kinase Kinase Kinase Kinase AT1G53165 53.5 2.4e-65 247.3
Cec11g1834 . 69 753 MAP Kinase Kinase Kinase Kinase AT3G15220 65.8 4.7e-231 797.7
Cec11g1200 . 254 514 MAP Kinase Kinase Kinase Kinase AT3G15220 51.5 1.5e-67 254.6
Cec07g0762 . 315 567 MAP Kinase Kinase Kinase Kinase AT3G15220 52.0 1.4e-65 248.1
Cec11g1200 . 4 826 MAP Kinase Kinase Kinase Kinase AT1G69220 58.7 4.1e-242 834.7
Cec07g0762 . 49 567 MAP Kinase Kinase Kinase Kinase AT1G69220 61.5 1.8e-152 537.0
Cec07g0761 . 46 364 MAP Kinase Kinase Kinase Kinase AT1G69220 52.9 8.1e-81 298.9
Cec09g2018 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.3 1.9e-253 872.1
Cec05g0525 . 25 385 MAP Kinase Kinase Kinase Kinase AT5G14720 50.3 8.7e-97 351.7
Cec10g0089 . 35 749 MAP Kinase Kinase Kinase Kinase AT4G24100 65.3 3.1e-249 858.2
Cec10g0089 . 39 750 MAP Kinase Kinase Kinase Kinase AT4G10730 65.2 3.3e-248 854.7
Cec10g1294 . 4 478 MAP Kinase Kinase Kinase Kinase AT1G70430 51.9 2.6e-132 469.5
Cec10g0089 . 33 397 MAP Kinase Kinase Kinase Kinase AT1G70430 56.8 3.6e-118 422.5
Cec10g1294 . 1 671 MAP Kinase Kinase Kinase Kinase AT1G79640 59.7 9.1e-216 746.9
Cec09g2018 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 2.6e-103 372.9
Cec10g1294 . 8 324 MAP Kinase Kinase Kinase Kinase AT1G23700 53.1 2.0e-87 320.1
Cec10g0089 . 43 334 MAP Kinase Kinase Kinase Kinase AT1G23700 50.8 2.3e-75 280.0
Cec05g0525 . 32 499 MAP Kinase Kinase Kinase Kinase AT4G14480 59.3 9.0e-144 507.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003387 1 1 1 1 1 2 1 2 3 0 3 2 1 1 1 1 3 2 1 3 1 3 1 1 1 2 1 1 4 1 47
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72127 PF00069 Pkinase 5.50E-66 CL0016 Cec PK