Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0818 ATGGCCAATTCGTTCAACAATTTGCTTCTTTGTTTGGGATTTGTGGTAATTTTTGGTCAAGCCATGGCTACTAGGTTCATTGATCTCATTGATAATCAAAAGATTGACACGACATGGTATGATGCTCGTGCCACCTTCTACGGCGACATAAGGGGTGATGAAACTATGCAGGGAGCTTGCGGGTATGGAAATTTATTCAAGCAAGGTTATGGGCTAGCAACAGCGGCACTTAGTACAGCACTTTTCAACAACGGTGGAGCTTGTGGAGCATGCTTTGAGATAATGTGTGTGAACAATGAACACAATTGGTGCATACCAAATGCAGGCACAATCAAAATAACGGCCACAAACTTCTGTCCTCCAAACTACACAAAAACACATGACATTTGGTGCAACCCACCCCAACGCCATTTTGATCTATCTCTTTACATGTTTACCAAAATGGCACCTTACAGGGCTGGAGTCATTTCGGTTCGCTATCGTCGGACGCTTTGCCACAAACAGGGCGGCATGCGTTTCGAGCTCAAAGGGAACCCTTATTGGCTTCTTGTGTTGCTCTACAATGTTGGTGGTGCTGGTGATGTTGTTGATGTTAAGATTAAAGGCTCTTCTACTGGTTGGCTTCAAATGTCAAGGAATTGGGGTCAAAATTGGCAGGTTGGTACCTTTTTAGTGGGACAAAGTTTGTCCTTTAGAGTCACTACTAGTGATGGGAAGACTATTGAATTTGATAATGTTGTGCCAAGCTCTTGGCAGTTAGGGCAGAACTTTGAAGGAAAGTATAATTTTTAG 792 43.18 MANSFNNLLLCLGFVVIFGQAMATRFIDLIDNQKIDTTWYDARATFYGDIRGDETMQGACGYGNLFKQGYGLATAALSTALFNNGGACGACFEIMCVNNEHNWCIPNAGTIKITATNFCPPNYTKTHDIWCNPPQRHFDLSLYMFTKMAPYRAGVISVRYRRTLCHKQGGMRFELKGNPYWLLVLLYNVGGAGDVVDVKIKGSSTGWLQMSRNWGQNWQVGTFLVGQSLSFRVTTSDGKTIEFDNVVPSSWQLGQNFEGKYNF 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19128708 19129585 + CePI673135_07g008180.1 Cec07g0818 207597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0818 263 PRINTS Expansin signature 128 145 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 145 158 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 181 202 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 245 261 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 111 121 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 216 237 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 97 108 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 69 83 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 PRINTS Expansin signature 169 181 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 Pfam Lytic transglycolase 74 160 IPR009009 -
Cec07g0818 263 SUPERFAMILY PHL pollen allergen 167 258 IPR036749 -
Cec07g0818 263 SUPERFAMILY Barwin-like endoglucanases 38 188 IPR036908 -
Cec07g0818 263 Pfam Expansin C-terminal domain 171 248 IPR007117 -
Cec07g0818 263 Gene3D - 170 263 IPR036749 -
Cec07g0818 263 Gene3D - 28 166 IPR036908 -
Cec07g0818 263 SMART dpbb_1 74 160 IPR007112 -
Cec07g0818 263 PANTHER EXPANSIN-A15 13 260 IPR002963 GO:0009664(InterPro)
Cec07g0818 263 CDD DPBB_EXPA_N 39 165 - -
Cec07g0818 263 FunFam Expansin 170 263 - -
Cec07g0818 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 259 IPR007117 -
Cec07g0818 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 57 170 IPR007112 -
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576(InterPro)
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 38 53 IPR007118 GO:0005576(InterPro)
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 56 74 IPR007118 GO:0005576(InterPro)
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576(InterPro)
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 153 169 IPR007118 GO:0005576(InterPro)
Cec07g0818 263 PRINTS Expansin/Lol pI family signature 245 259 IPR007118 GO:0005576(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0818 Cec-Chr7:19128708 Cec09g2072 Cec-Chr9:37762880 3.00E-77 dispersed
Cec07g0818 Cec-Chr7:19128708 Cec04g0951 Cec-Chr4:29183375 9.30E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0818 - - - 0.0