Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0839 ATGGCGACGATGACCAACGCGACGGCGATGGGTGGTGCATGTCCGGCGGCGATGAAAGCCACTTCAGACGGCATTTTCCAAGGCGATAATCCTCTGGATTATGCCCTCCCTCTTGCAATTCTTCAGATTTGTCTCGTCGTCCTTCTCACTCGCCTTCTTTCTTTCCTTCTTCGTCCTGTCCGACAACCTCGTGTTATTGCTGAGATCGTCGGCGGAATCTTGCTGGGTCCATCGGCACTTGGGCGGAACTTGAGTTACTTACACACAATCTTCCCGGCGAGGAGTCTCACCGTATTGGACACATTGGCCAATTTGGGTCTTCTTTTCTTCCTTTTTCTTGTCGGCTTGGAGTTGGACCTTAAATCCCTCCGCCGCACCGGAAAACGAGCCATGTGCATTGCCTTTGCTGGGATCACCTTCCCCTTCGTCCTCGGAATCGGCACTTCTTACATCCTTCGATCAACCATCTCCAAAGGCGTCAATGAAGCTGCATTGCTCGTCTTTATGGGTGTCGCTCTTTCCATCACTGCCTTTCCTGTTCTTGCTCGTATTTTGGCGGAGCTCAAGCTTTTGACCACGGACGTCGGACGGATGGCTATGTCCGCCGCTGCCGTTAACGACGTTGCAGCTTGGATCCTTCTGGCATTGGCAATTGCACTCTCTGGCACCGGCCACTCCCCTCTGGTTTCCCTTTGGGTTTTCCTATCTGGCGCTACTTTTATCCTGTTTTGTACCTTCACTATTCCGCCGGTGTTTCGGTGGATGTCGCAACGGTGCTCTGAGGGAGAGCCGGTGAAGGAATTGTACATTTGTGCCACTCTTTCCATCGTTTTGGCTGCTGGGTTCATGACTGATTTGATCGGAATCCATGCTCTGTTTGGAGCTTTCGTAGTCGGAGTTTTGATTCCGAAAGAAGGCCCATTCGCCGGAGTTCTGGTGGAGAAAGTTGAAGATCTCGTGTCCAGTCTTTTCCTTCCCTTATACTTCGTTTCCAGCGGATTGAAAACAAACGTTGCAACAATTAAAGGAGGTAAATCATGGGGTCTTCTCGTTTTAGTCATTTTCAATGCTTGTTTCGGTAAAATCGTCGGAACTGTCTCTGTTTCCCTAATGTGCAAAATGCCACTTCAAGAATCAGTTGCTTTGGGGTTCTTAATGAACACGAAAGGCTTGGTGGAATTAATCGTTCTGAATATCGGCAAAGACAGGAAGGTTTTGAATGATCAAACATTTGCAATTATGGTTCTAATGGCAATCTTCACAACTTTCATCACAACCCCTATTGTTATGGCCGTTTACAAGCCGGCTAAAAGACACAGCAAATCTAACTACCACCATAGAAAACTGGAGAGGGAAAATCCCAATTCCGAGCTCCGCATTCTGGCCTGTTTCCACTCCTTCGGAAACATTCCGGCGACGATTAACCTTATTGAGGCTTCTCGAGGGATTGAAAAGAAAGAAGGGCTCTGTGTTTATGCTCTGCATTTAACGGAGCTAACAGAGAGATCCTCTGCCATTCTTATGGTTCACAAAGCAAGGAAAAACGGCGTTCCCTTTTGGAACAAAGGCCGTGTCGATTCGAACCAGATCGTCGTTGCCTTCGAGGCATTCCGACAACTCAGCCGGGTTTCCATCCGGCCGATGACTGCCATTTCTGCTCTGTCCAACATGCACGAAGATATCTGTAGCAGTGCTGAAGCGAAAAGGGCCGCCATTATAATTCTCCCCTTTCACAAACACCAAAGATTGGATGGATCTCTTGAAACGACGAGGACTGATTACCGGTCTGTCAATCGGAAAGTTCTGGAACAAGCCCCCTGCTCCGTCGCAATTTTGATCGACAGAGGACTCGGCGGTGGGTCTCACGTCAACGCAAGTAACGTCTCCTCCACAATCACCGTCTTCTTCTTCGGCGGACGTGACGACCGTGAAGCTCTGGCGTTCGGGAAAAGAATGGCGGAACATCCCGGAATCAGCCTGCACGTCGTCCGATTCACACCCAGCGCTGATTTCGCGGTGGAATCCGTCGCCGTGGACATAAACAAGAACAATTCGATGGATTCCGACGGTGACGAAAAAGCGCTAGCGTCGATTGCATACGAAGAGAGGAACGTGAGCAAAGGGAGCCACGCGGTTGAAGCGATGAAGGAATTCAATAAATCCAATTTGATTTTGGTCGGACGAATGCCGGAGGGGGAAGTGGTGAGGAGTTTGAATGTGAACGGTGGGGAAGCTTCGGAGCTCGGGCCCGTCGGTGGGGTGTTGGCATTGGCGGAGTTTTCGACGATGGCGTCGGTGCTGGTGGTGCAGCAATTTCGTGGTGAACAGTCACAGTCGCCGGTGGATTCGACTCGAGAGGAATCAACTGAAGACGATCGTTAA 2382 50.13 MATMTNATAMGGACPAAMKATSDGIFQGDNPLDYALPLAILQICLVVLLTRLLSFLLRPVRQPRVIAEIVGGILLGPSALGRNLSYLHTIFPARSLTVLDTLANLGLLFFLFLVGLELDLKSLRRTGKRAMCIAFAGITFPFVLGIGTSYILRSTISKGVNEAALLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGHSPLVSLWVFLSGATFILFCTFTIPPVFRWMSQRCSEGEPVKELYICATLSIVLAAGFMTDLIGIHALFGAFVVGVLIPKEGPFAGVLVEKVEDLVSSLFLPLYFVSSGLKTNVATIKGGKSWGLLVLVIFNACFGKIVGTVSVSLMCKMPLQESVALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVMAVYKPAKRHSKSNYHHRKLERENPNSELRILACFHSFGNIPATINLIEASRGIEKKEGLCVYALHLTELTERSSAILMVHKARKNGVPFWNKGRVDSNQIVVAFEAFRQLSRVSIRPMTAISALSNMHEDICSSAEAKRAAIIILPFHKHQRLDGSLETTRTDYRSVNRKVLEQAPCSVAILIDRGLGGGSHVNASNVSSTITVFFFGGRDDREALAFGKRMAEHPGISLHVVRFTPSADFAVESVAVDINKNNSMDSDGDEKALASIAYEERNVSKGSHAVEAMKEFNKSNLILVGRMPEGEVVRSLNVNGGEASELGPVGGVLALAEFSTMASVLVVQQFRGEQSQSPVDSTREESTEDDR 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20362245 20365233 + CePI673135_07g008390.1 Cec07g0839 207618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0839 793 PANTHER CATION/H + ANTIPORTER 14 778 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cec07g0839 793 Gene3D - 489 738 - -
Cec07g0839 793 Gene3D - 38 443 IPR038770 -
Cec07g0839 793 Pfam Sodium/hydrogen exchanger family 47 429 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cec07g0839 793 MobiDBLite consensus disorder prediction 773 793 - -
Cec07g0839 793 FunFam Cation/H(+) antiporter 15 38 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0974 Cec-Chr4:29403388 Cec07g0839 Cec-Chr7:20362245 1.10E-210 dispersed
Cec07g0834 Cec-Chr7:19944797 Cec07g0839 Cec-Chr7:20362245 0.00E+00 dispersed
Cec07g0839 Cec-Chr7:20362245 Cec10g1543 Cec-Chr10:29918300 1.90E-103 dispersed
Cec07g0837 Cec-Chr7:20277209 Cec07g0839 Cec-Chr7:20362245 0.00E+00 proximal
Cec07g0839 Cec-Chr7:20362245 Cec07g0842 Cec-Chr7:20478183 2.80E-272 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0839 K26731 - csv:101202937 1373.22