Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0842 CGATCTTCTGCCGCCAACGAATTGCACCCAAGTTTTCATCATTCTGATTCAGAAACCTTCCTGGGAAGCATATTTTTGAACAGAAAGCCGTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTAGGACCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATGACATTGTTAGATACCATAGCAAACATTGGGTTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGCATTGCCATTACTGGAATTTGCGTTCCCTTTGCATTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTGAATGCTTCTGCATTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCCTTTCCCGTCTTAGCTCGCATTCTTGCTGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGACGTAGCTGCCTGGATTCTCCTTTCTCTTGCCATTGCATTATCAGGTTCTGATAAATCTCCCCTAACTGCAGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTTGTGGCCGCTGTCGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGTGCCACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCTAAGGATGGACCATTAGTGGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTGTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATTGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTAGTGTCCCTTCTTTGTAAAGTACCTGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCAAGGAGTGCCAAATTAGCCGATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACGCAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAACGTTCCATCAATTATAAATCTGCTTGAGGCCTCGAGAGGAATCCAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGCGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCAGGTTCCAACCATGTTATCGTTGCGTTTGAAGCTTATCAACAACTGAGCAGAGTATTCATCCGAGCGATGACAGCCATTTCCTCCATGTCTGACATACATGAAGATATCTGTGCTACTGCCGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCCCTGGAGACTACTCAAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTCGTTGATCGGGGGTTGGGTGGAACAACCCATGTTTCTTCGAGCAATGTTTCACTTTTCATCGCTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCCGAGCACCCTGGCATTAGGTTGATGGTTATTCGTTTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGAATTCTTCTGCGAAGATGGTTTCTCAAGATGATGAATTTCTTTCTGAGTTCAGGAACAATGTGAGCAATAACGATTCCATCATATATGCAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTCCAGGAGCTGAAAAACTGCAATCTGTATCTCGTTGGTCGAACACCGGATGTCAATTCAACCTTTGCCTTAAACAGAAGTGACTGTCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCGAACTTCACGATTTCAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCTGAGTTACTGGTGAATTTGGCTTCAGATTCTGCTGATGGAGAATCAGAATCATCATAA 2322 43.32 RSSAANELHPSFHHSDSETFLGSIFLNRKPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSMTLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAITGICVPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLSLAIALSGSDKSPLTAVWVLLSGCGFVVAAVVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLADYKHRKIERKNKNTQLRMLTCFHSAGNVPSIINLLEASRGIQKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSGSNHVIVAFEAYQQLSRVFIRAMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTQSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFIAVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAKMVSQDDEFLSEFRNNVSNNDSIIYAEKTIKSAAEAMDTVQELKNCNLYLVGRTPDVNSTFALNRSDCPELGPVGNLLTSPNFTISASVLVVQQYRSELLVNLASDSADGESESS 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20478183 20481816 + CePI673135_07g008420.1 Cec07g0842 207621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0842 773 Pfam Sodium/hydrogen exchanger family 20 399 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cec07g0842 773 PANTHER CATION/H + ANTIPORTER 28 756 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cec07g0842 773 FunFam Cation/H(+) antiporter 15 20 411 - -
Cec07g0842 773 Gene3D - 19 412 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0535 Cec-Chr7:6372168 Cec07g0842 Cec-Chr7:20478183 1.80E-104 dispersed
Cec07g0837 Cec-Chr7:20277209 Cec07g0842 Cec-Chr7:20478183 5.00E-270 dispersed
Cec07g0842 Cec-Chr7:20478183 Cec09g1265 Cec-Chr9:14446742 6.10E-86 dispersed
Cec07g0839 Cec-Chr7:20362245 Cec07g0842 Cec-Chr7:20478183 2.80E-272 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0842 K26731 - csv:101223205 1303.89